1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo160008

Smo160008


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS3a component


Gene families : OG0001983 (Archaeplastida) Phylogenetic Tree(s): OG0001983_tree ,
OG_05_0001683 (LandPlants) Phylogenetic Tree(s): OG_05_0001683_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo160008
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271660 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
AMTR_s00026p00042160 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
AT3G04840 No alias Ribosomal protein S3Ae 0.06 Archaeplastida
AT4G34670 No alias Ribosomal protein S3Ae 0.09 Archaeplastida
Cpa|evm.model.tig00020710.39 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
Cre13.g568650 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
GSVIVT01021836001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 Archaeplastida
Gb_02289 No alias component RPS3a of SSU proteome 0.03 Archaeplastida
LOC_Os02g18550.1 No alias component RPS3a of SSU proteome 0.06 Archaeplastida
LOC_Os03g10340.1 No alias component RPS3a of SSU proteome 0.08 Archaeplastida
LOC_Os12g21798.1 No alias component RPS3a of SSU proteome 0.03 Archaeplastida
MA_31004g0010 No alias component RPS3a of SSU proteome 0.06 Archaeplastida
Mp6g02810.1 No alias component RPS3a of SSU proteome 0.06 Archaeplastida
Pp3c11_17260V3.1 No alias Ribosomal protein S3Ae 0.06 Archaeplastida
Pp3c12_18590V3.1 No alias Ribosomal protein S3Ae 0.03 Archaeplastida
Pp3c18_2090V3.1 No alias Ribosomal protein S3Ae 0.07 Archaeplastida
Pp3c21_21510V3.1 No alias Ribosomal protein S3Ae 0.05 Archaeplastida
Pp3c22_18300V3.1 No alias Ribosomal protein S3Ae 0.07 Archaeplastida
Pp3c4_14160V3.1 No alias Ribosomal protein S3Ae 0.07 Archaeplastida
Solyc03g097900.3.1 No alias component RPS3a of SSU proteome 0.03 Archaeplastida
Solyc06g072490.3.1 No alias component RPS3a of SSU proteome 0.1 Archaeplastida
Zm00001e038777_P001 No alias component RPS3a of SSU proteome 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001593 Ribosomal_S3Ae 15 221
No external refs found!