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  5. Smo161986

Smo161986


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL36a component


Gene families : OG0002069 (Archaeplastida) Phylogenetic Tree(s): OG0002069_tree ,
OG_05_0002870 (LandPlants) Phylogenetic Tree(s): OG_05_0002870_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo161986
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00106300 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
AMTR_s00040p00107140 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
AMTR_s00077p00123980 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 Archaeplastida
AT3G23390 No alias Zinc-binding ribosomal protein family protein 0.04 Archaeplastida
AT4G14320 No alias Zinc-binding ribosomal protein family protein 0.2 Archaeplastida
Cpa|evm.model.tig00000489.11 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 Archaeplastida
Cre06.g310700 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 Archaeplastida
GSVIVT01012052001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
GSVIVT01032097001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
Gb_13148 No alias component RPL36a of LSU proteome component 0.13 Archaeplastida
Gb_34419 No alias component RPL36a of LSU proteome component 0.13 Archaeplastida
LOC_Os07g26740.1 No alias component RPL36a of LSU proteome component 0.06 Archaeplastida
LOC_Os07g33898.1 No alias component RPL36a of LSU proteome component 0.03 Archaeplastida
LOC_Os07g33997.1 No alias component RPL36a of LSU proteome component 0.03 Archaeplastida
MA_99845g0010 No alias component RPL36a of LSU proteome component 0.22 Archaeplastida
Mp2g25770.1 No alias component RPL36a of LSU proteome component 0.29 Archaeplastida
Pp3c26_11220V3.1 No alias Zinc-binding ribosomal protein family protein 0.23 Archaeplastida
Pp3c2_27320V3.1 No alias Zinc-binding ribosomal protein family protein 0.09 Archaeplastida
Pp3c3_10260V3.1 No alias Zinc-binding ribosomal protein family protein 0.18 Archaeplastida
Pp3c4_27290V3.1 No alias Zinc-binding ribosomal protein family protein 0.06 Archaeplastida
Pp3c7_20120V3.1 No alias Zinc-binding ribosomal protein family protein 0.03 Archaeplastida
Solyc03g112850.3.1 No alias component RPL36a of LSU proteome component 0.08 Archaeplastida
Zm00001e010489_P002 No alias component RPL36a of LSU proteome component 0.28 Archaeplastida
Zm00001e033410_P001 No alias component RPL36a of LSU proteome component 0.09 Archaeplastida
Zm00001e035123_P001 No alias component RPL36a of LSU proteome component 0.13 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
CC GO:0030008 TRAPP complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
CC GO:0034998 oligosaccharyltransferase I complex IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000552 Ribosomal_L44e 19 93
No external refs found!