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  5. Smo163947

Smo163947


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS27 component


Gene families : OG0001943 (Archaeplastida) Phylogenetic Tree(s): OG0001943_tree ,
OG_05_0003066 (LandPlants) Phylogenetic Tree(s): OG_05_0003066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo163947
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00194290 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 Archaeplastida
AT2G45710 No alias Zinc-binding ribosomal protein family protein 0.06 Archaeplastida
AT3G61110 ARS27A, RS27A ribosomal protein S27 0.1 Archaeplastida
AT5G47930 No alias Zinc-binding ribosomal protein family protein 0.15 Archaeplastida
Cpa|evm.model.tig00001299.2 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 Archaeplastida
Cre12.g529400 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
GSVIVT01001113001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.15 Archaeplastida
GSVIVT01032964001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
MA_54625g0010 No alias component RPS27 of SSU proteome 0.09 Archaeplastida
Mp5g09510.1 No alias component RPS27 of SSU proteome 0.26 Archaeplastida
Pp3c18_2100V3.1 No alias ribosomal protein S27 0.04 Archaeplastida
Pp3c1_15840V3.1 No alias ribosomal protein S27 0.18 Archaeplastida
Pp3c21_21540V3.1 No alias ribosomal protein S27 0.04 Archaeplastida
Pp3c22_18310V3.1 No alias ribosomal protein S27 0.17 Archaeplastida
Pp3c2_20540V3.1 No alias ribosomal protein S27 0.16 Archaeplastida
Solyc01g008080.3.1 No alias component RPS27 of SSU proteome 0.04 Archaeplastida
Zm00001e012048_P001 No alias component RPS27 of SSU proteome 0.07 Archaeplastida
Zm00001e024704_P001 No alias component RPS27 of SSU proteome 0.09 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000592 Ribosomal_S27e 30 84
No external refs found!