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  4. Sequence
  5. Smo164593

Smo164593


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS5 component


Gene families : OG0002222 (Archaeplastida) Phylogenetic Tree(s): OG0002222_tree ,
OG_05_0002391 (LandPlants) Phylogenetic Tree(s): OG_05_0002391_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo164593
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00119380 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 Archaeplastida
AMTR_s00090p00050460 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.21 Archaeplastida
AT2G37270 RPS5B, ATRPS5B ribosomal protein 5B 0.27 Archaeplastida
AT3G11940 AML1, RPS5A, ATRPS5A ribosomal protein 5A 0.26 Archaeplastida
Cpa|evm.model.tig00021332.10 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.23 Archaeplastida
Cre06.g290950 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.24 Archaeplastida
GSVIVT01026328001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.21 Archaeplastida
GSVIVT01033419001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.26 Archaeplastida
Gb_04954 No alias component RPS5 of SSU proteome 0.08 Archaeplastida
Gb_10560 No alias component RPS5 of SSU proteome 0.03 Archaeplastida
Gb_10561 No alias component RPS5 of SSU proteome 0.11 Archaeplastida
LOC_Os01g01060.1 No alias component RPS5 of SSU proteome 0.15 Archaeplastida
LOC_Os11g29190.1 No alias component RPS5 of SSU proteome 0.15 Archaeplastida
MA_10428487g0010 No alias component RPS5 of SSU proteome 0.19 Archaeplastida
Mp3g10570.1 No alias component RPS5 of SSU proteome 0.36 Archaeplastida
Pp3c20_18970V3.1 No alias ribosomal protein 5B 0.12 Archaeplastida
Pp3c23_6150V3.1 No alias ribosomal protein 5B 0.25 Archaeplastida
Pp3c24_18880V3.1 No alias ribosomal protein 5B 0.18 Archaeplastida
Pp3c8_16820V3.1 No alias ribosomal protein 5B 0.3 Archaeplastida
Pp3c8_16860V3.1 No alias ribosomal protein 5B 0.2 Archaeplastida
Solyc10g078620.1.1 No alias component RPS5 of SSU proteome 0.27 Archaeplastida
Solyc11g042610.2.1 No alias component RPS5 of SSU proteome 0.24 Archaeplastida
Zm00001e025608_P002 No alias component RPS5 of SSU proteome 0.3 Archaeplastida
Zm00001e031425_P002 No alias component RPS5 of SSU proteome 0.27 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR023798 Ribosomal_S7_dom 60 202
No external refs found!