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  5. Smo165098

Smo165098


Description : Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase


Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0000108 (LandPlants) Phylogenetic Tree(s): OG_05_0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo165098
Cluster HCCA: Cluster_323

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264370 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.01 Archaeplastida
AMTR_s00123p00050980 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.01 Archaeplastida
GSVIVT01015852001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
Gb_01460 No alias pectin methylesterase 0.01 Archaeplastida
LOC_Os09g39760.1 No alias pectin methylesterase 0.06 Archaeplastida
LOC_Os11g45720.1 No alias pectin methylesterase 0.01 Archaeplastida
LOC_Os11g45730.1 No alias pectin methylesterase 0.01 Archaeplastida
Mp3g01170.1 No alias pectin methylesterase 0.01 Archaeplastida
Pp3c19_8330V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c25_3840V3.1 No alias Pectin lyase-like superfamily protein 0.01 Archaeplastida
Zm00001e027944_P002 No alias pectin methylesterase 0.01 Archaeplastida
Zm00001e033546_P001 No alias pectin methylesterase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP Neighborhood
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 61 352
No external refs found!