Smo16613

Description : 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Oryza sativa subsp. japonica

Gene families : OG0000267 (Archaeplastida) Phylogenetic Tree(s): OG0000267_tree ,
OG_05_0000908 (LandPlants) Phylogenetic Tree(s): OG_05_0000908_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo16613
Cluster	HCCA: Cluster_94

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00092p00172590	evm_27.TU.AmTr_v1...	Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein	0.03	Archaeplastida
MA_10425950g0010	No alias	carotenoid cleavage dioxygenase (CCD4)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	None	Extended
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEA	Interproscan
MF	GO:0051213	dioxygenase activity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004294	Carotenoid_Oase	2	218

External Links

No external refs found!