1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo170974

Smo170974


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component


Gene families : OG0000271 (Archaeplastida) Phylogenetic Tree(s): OG0000271_tree ,
OG_05_0000806 (LandPlants) Phylogenetic Tree(s): OG_05_0000806_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo170974
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g37690.1 No alias component COI of jasmonic acid receptor complex 0.05 Archaeplastida
MA_63147g0010 No alias Coronatine-insensitive protein homolog 1b OS=Oryza... 0.03 Archaeplastida
Pp3c23_18960V3.1 No alias RNI-like superfamily protein 0.02 Archaeplastida
Zm00001e031742_P001 No alias component COI of jasmonic acid receptor complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 169 189
No external refs found!