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  5. Smo171028

Smo171028


Description : Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.L-homocysteine S-methyltransferase activities.cobalamine-independent methionine synthase


Gene families : OG0002593 (Archaeplastida) Phylogenetic Tree(s): OG0002593_tree ,
OG_05_0002149 (LandPlants) Phylogenetic Tree(s): OG_05_0002149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo171028
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00117110 evm_27.TU.AmTr_v1... Amino acid metabolism.biosynthesis.aspartate... 0.04 Archaeplastida
AT3G03780 MS2, ATMS2 methionine synthase 2 0.08 Archaeplastida
AT5G17920 ATCIMS, ATMS1, ATMETS Cobalamin-independent synthase family protein 0.08 Archaeplastida
Cre03.g180750 No alias Amino acid metabolism.biosynthesis.aspartate... 0.06 Archaeplastida
GSVIVT01029971001 No alias Amino acid metabolism.biosynthesis.aspartate... 0.1 Archaeplastida
GSVIVT01037511001 No alias Amino acid metabolism.biosynthesis.aspartate... 0.05 Archaeplastida
Gb_23743 No alias methyl-tetrahydrofolate-dependent methionine synthase 0.05 Archaeplastida
LOC_Os12g42876.1 No alias methyl-tetrahydrofolate-dependent methionine synthase 0.08 Archaeplastida
LOC_Os12g42884.1 No alias methyl-tetrahydrofolate-dependent methionine synthase 0.12 Archaeplastida
MA_10090g0010 No alias methyl-tetrahydrofolate-dependent methionine synthase 0.04 Archaeplastida
MA_10427606g0010 No alias methyl-tetrahydrofolate-dependent methionine synthase 0.03 Archaeplastida
MA_619693g0010 No alias 5-methyltetrahydropteroyltriglutamate--homocysteine... 0.01 Archaeplastida
Mp1g04570.1 No alias methyl-tetrahydrofolate-dependent methionine synthase 0.03 Archaeplastida
Solyc10g081510.2.1 No alias methyl-tetrahydrofolate-dependent methionine synthase 0.09 Archaeplastida
Zm00001e003281_P001 No alias methyl-tetrahydrofolate-dependent methionine synthase 0.06 Archaeplastida
Zm00001e005228_P001 No alias methyl-tetrahydrofolate-dependent methionine synthase 0.13 Archaeplastida
Zm00001e012368_P001 No alias methyl-tetrahydrofolate-dependent methionine synthase 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004107 chorismate synthase activity IEP Neighborhood
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013215 Cbl-indep_Met_Synth_N 3 317
No external refs found!