1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo171164

Smo171164


Description : Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT4 regulatory component


Gene families : OG0003274 (Archaeplastida) Phylogenetic Tree(s): OG0003274_tree ,
OG_05_0003195 (LandPlants) Phylogenetic Tree(s): OG_05_0003195_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo171164
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AT1G45000 No alias AAA-type ATPase family protein 0.04 Archaeplastida
AT5G43010 RPT4A regulatory particle triple-A ATPase 4A 0.03 Archaeplastida
Cpa|evm.model.tig00000718.6 No alias Protein degradation.26S proteasome.regulatory... 0.02 Archaeplastida
Cre17.g710150 No alias Protein degradation.26S proteasome.regulatory... 0.05 Archaeplastida
LOC_Os02g10640.1 No alias regulatory component RPT4 of 26S proteasome 0.02 Archaeplastida
Pp3c12_8530V3.1 No alias AAA-type ATPase family protein 0.03 Archaeplastida
Pp3c4_15180V3.1 No alias AAA-type ATPase family protein 0.04 Archaeplastida
Solyc01g109940.3.1 No alias regulatory component RPT4 of 26S proteasome 0.03 Archaeplastida
Zm00001e014032_P001 No alias regulatory component RPT4 of 26S proteasome 0.03 Archaeplastida
Zm00001e025009_P001 No alias regulatory component RPT4 of 26S proteasome 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004807 triose-phosphate isomerase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004827 proline-tRNA ligase activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 175 308
No external refs found!