1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo172795

Smo172795


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS6 component


Gene families : OG0002153 (Archaeplastida) Phylogenetic Tree(s): OG0002153_tree ,
OG_05_0001864 (LandPlants) Phylogenetic Tree(s): OG_05_0001864_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo172795
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00238890 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
AMTR_s00048p00058600 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
AMTR_s00077p00035710 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
AT4G31700 RPS6A, RPS6 ribosomal protein S6 0.23 Archaeplastida
AT5G10360 EMB3010, RPS6B Ribosomal protein S6e 0.23 Archaeplastida
Cpa|evm.model.tig00000704.73 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.22 Archaeplastida
Cre09.g400650 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.2 Archaeplastida
GSVIVT01009072001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
GSVIVT01015776001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
LOC_Os03g27260.1 No alias component RPS6 of SSU proteome 0.21 Archaeplastida
LOC_Os07g42950.1 No alias component RPS6 of SSU proteome 0.21 Archaeplastida
MA_10426804g0010 No alias component RPS6 of SSU proteome 0.14 Archaeplastida
MA_72828g0010 No alias component RPS6 of SSU proteome 0.16 Archaeplastida
Mp4g01750.1 No alias component RPS6 of SSU proteome 0.3 Archaeplastida
Pp3c11_21120V3.1 No alias Ribosomal protein S6e 0.21 Archaeplastida
Pp3c15_25430V3.1 No alias Ribosomal protein S6e 0.09 Archaeplastida
Pp3c15_25780V3.1 No alias Ribosomal protein S6e 0.22 Archaeplastida
Pp3c7_5780V3.1 No alias Ribosomal protein S6e 0.19 Archaeplastida
Solyc08g006040.3.1 No alias component RPS6 of SSU proteome 0.12 Archaeplastida
Solyc08g074240.3.1 No alias component RPS6 of SSU proteome 0.26 Archaeplastida
Solyc12g096300.2.1 No alias component RPS6 of SSU proteome 0.23 Archaeplastida
Zm00001e010802_P001 No alias component RPS6 of SSU proteome 0.23 Archaeplastida
Zm00001e035580_P002 No alias component RPS6 of SSU proteome 0.22 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001377 Ribosomal_S6e 1 128
No external refs found!