1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo173646

Smo173646


Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.BIG-type ARF-GEF factor


Gene families : OG0001057 (Archaeplastida) Phylogenetic Tree(s): OG0001057_tree ,
OG_05_0002382 (LandPlants) Phylogenetic Tree(s): OG_05_0002382_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo173646
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00031550 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.07 Archaeplastida
AMTR_s00131p00043500 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
AT1G01960 EDA10 SEC7-like guanine nucleotide exchange family protein 0.12 Archaeplastida
AT3G43300 ATMIN7, BEN1 HOPM interactor 7 0.13 Archaeplastida
AT3G60860 No alias SEC7-like guanine nucleotide exchange family protein 0.11 Archaeplastida
AT4G38200 No alias SEC7-like guanine nucleotide exchange family protein 0.09 Archaeplastida
Cpa|evm.model.tig00000852.23 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
GSVIVT01014993001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
GSVIVT01023854001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
GSVIVT01027623001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
Gb_04048 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 Archaeplastida
Gb_07642 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.05 Archaeplastida
Gb_26513 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.09 Archaeplastida
LOC_Os03g14260.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 Archaeplastida
LOC_Os06g41780.2 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.03 Archaeplastida
LOC_Os07g37750.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 Archaeplastida
MA_10429864g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.05 Archaeplastida
MA_20138g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 Archaeplastida
MA_20563g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.07 Archaeplastida
Mp7g11590.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.05 Archaeplastida
Mp8g18220.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.1 Archaeplastida
Pp3c11_12270V3.1 No alias SEC7-like guanine nucleotide exchange family protein 0.03 Archaeplastida
Pp3c18_8290V3.1 No alias HOPM interactor 7 0.05 Archaeplastida
Pp3c21_12020V3.1 No alias HOPM interactor 7 0.02 Archaeplastida
Pp3c21_12080V3.1 No alias HOPM interactor 7 0.02 Archaeplastida
Pp3c7_14180V3.1 No alias SEC7-like guanine nucleotide exchange family protein 0.04 Archaeplastida
Solyc01g091460.3.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.05 Archaeplastida
Solyc01g112350.3.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 Archaeplastida
Solyc12g017830.3.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.05 Archaeplastida
Zm00001e001058_P001 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 Archaeplastida
Zm00001e010568_P001 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.05 Archaeplastida
Zm00001e035267_P004 No alias No annotation 0.06 Archaeplastida
Zm00001e037574_P001 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
CC GO:0033588 Elongator holoenzyme complex IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR032817 Mon2_C 1282 1409
No external refs found!