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  5. Smo179259

Smo179259


Description : Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein recruiting.Sar1-type GTPase


Gene families : OG0001825 (Archaeplastida) Phylogenetic Tree(s): OG0001825_tree ,
OG_05_0001675 (LandPlants) Phylogenetic Tree(s): OG_05_0001675_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo179259
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00037810 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.06 Archaeplastida
AT1G56330 SAR1, ATSAR1B,... secretion-associated RAS 1B 0.03 Archaeplastida
AT3G62560 No alias Ras-related small GTP-binding family protein 0.02 Archaeplastida
Cre11.g468300 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
LOC_Os01g15010.1 No alias GTPase (Sar1) 0.05 Archaeplastida
LOC_Os01g23620.1 No alias GTPase (Sar1) 0.06 Archaeplastida
MA_14388g0010 No alias GTPase (Sar1) 0.04 Archaeplastida
Mp2g15910.1 No alias GTPase (Sar1) 0.04 Archaeplastida
Pp3c2_12620V3.1 No alias secretion-associated RAS super family 2 0.02 Archaeplastida
Solyc01g079535.1.1 No alias GTPase (Sar1) 0.05 Archaeplastida
Solyc06g009660.3.1 No alias GTPase (Sar1) 0.04 Archaeplastida
Zm00001e017591_P001 No alias GTPase (Sar1) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Neighborhood
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Neighborhood
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Neighborhood
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 8 190
No external refs found!