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  5. Smo180368

Smo180368


Description : RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor


Gene families : OG0001417 (Archaeplastida) Phylogenetic Tree(s): OG0001417_tree ,
OG_05_0001785 (LandPlants) Phylogenetic Tree(s): OG_05_0001785_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo180368
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00078710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TAZ histone... 0.09 Archaeplastida
AT1G16710 HAC12 histone acetyltransferase of the CBP family 12 0.11 Archaeplastida
AT1G79000 ATHPCAT2, HAC1,... histone acetyltransferase of the CBP family 1 0.08 Archaeplastida
AT3G12980 ATHPCAT4, HAC5 histone acetyltransferase of the CBP family 5 0.02 Archaeplastida
Cre03.g189650 No alias RNA biosynthesis.transcriptional activation.TAZ histone... 0.01 Archaeplastida
GSVIVT01029442001 No alias RNA biosynthesis.transcriptional activation.TAZ histone... 0.14 Archaeplastida
Gb_02923 No alias histone acetyltransferase (HAC/HPCAT). component KIX of... 0.06 Archaeplastida
Gb_24654 No alias histone acetyltransferase (HAC/HPCAT). component KIX of... 0.04 Archaeplastida
LOC_Os01g14370.1 No alias histone acetyltransferase (HAC/HPCAT) 0.05 Archaeplastida
LOC_Os02g04490.1 No alias histone acetyltransferase (HAC/HPCAT) 0.1 Archaeplastida
MA_13363g0010 No alias histone acetyltransferase (HAC/HPCAT) 0.08 Archaeplastida
MA_8978g0010 No alias histone acetyltransferase (HAC/HPCAT) 0.03 Archaeplastida
Mp2g22480.1 No alias histone acetyltransferase (HAC/HPCAT). component KIX of... 0.07 Archaeplastida
Pp3c12_3460V3.1 No alias histone acetyltransferase of the CBP family 1 0.08 Archaeplastida
Pp3c17_2460V3.1 No alias histone acetyltransferase of the CBP family 1 0.1 Archaeplastida
Solyc01g008120.4.1 No alias histone acetyltransferase (HAC/HPCAT) 0.04 Archaeplastida
Solyc04g008610.3.1 No alias histone acetyltransferase (HAC/HPCAT) 0.09 Archaeplastida
Zm00001e013612_P001 No alias histone acetyltransferase (HAC/HPCAT) 0.1 Archaeplastida
Zm00001e018020_P001 No alias No annotation 0.07 Archaeplastida
Zm00001e025338_P001 No alias histone acetyltransferase (HAC/HPCAT) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000197 Znf_TAZ 909 977
No external refs found!