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  5. Smo182514

Smo182514


Description : Chromatin organisation.DNA methylation.ROS1-mediated DNA demethylation.ROS1 methylcytosine-specific DNA glycosylase


Gene families : OG0001102 (Archaeplastida) Phylogenetic Tree(s): OG0001102_tree ,
OG_05_0001721 (LandPlants) Phylogenetic Tree(s): OG_05_0001721_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo182514
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00215000 evm_27.TU.AmTr_v1... DNA damage response.DNA repair mechanisms.base excision... 0.02 Archaeplastida
LOC_Os02g29380.1 No alias methylcytosine-specific DNA glycosylase (ROS1) 0.02 Archaeplastida
LOC_Os05g37350.1 No alias methylcytosine-specific DNA glycosylase (ROS1).... 0.02 Archaeplastida
LOC_Os05g37410.1 No alias methylcytosine-specific DNA glycosylase (ROS1).... 0.01 Archaeplastida
Pp3c2_260V3.1 No alias demeter-like 1 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR028925 RRM_DME 353 453
No external refs found!