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  5. Smo182543

Smo182543


Description : Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.diaminopimelate decarboxylase


Gene families : OG0003036 (Archaeplastida) Phylogenetic Tree(s): OG0003036_tree ,
OG_05_0004598 (LandPlants) Phylogenetic Tree(s): OG_05_0004598_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo182543
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Cre01.g050100 No alias Amino acid metabolism.biosynthesis.aspartate... 0.01 Archaeplastida
Pp3c23_16600V3.1 No alias Pyridoxal-dependent decarboxylase family protein 0.05 Archaeplastida
Pp3c24_7340V3.1 No alias Pyridoxal-dependent decarboxylase family protein 0.03 Archaeplastida
Pp3c24_7341V3.1 No alias Pyridoxal-dependent decarboxylase family protein 0.02 Archaeplastida
Solyc01g109850.3.1 No alias diaminopimelate decarboxylase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016255 attachment of GPI anchor to protein IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
InterPro domains Description Start Stop
IPR022644 De-COase2_N 102 364
No external refs found!