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Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS30 component
Gene families : OG0003752 (Archaeplastida) Phylogenetic Tree(s): OG0003752_tree ,
OG_05_0003387 (LandPlants) Phylogenetic Tree(s): OG_05_0003387_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo227173 | |
| Cluster | HCCA: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00036p00192320 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | Archaeplastida | |
| AT2G19750 | No alias | Ribosomal protein S30 family protein | 0.04 | Archaeplastida | |
| AT4G29390 | No alias | Ribosomal protein S30 family protein | 0.03 | Archaeplastida | |
| AT5G56670 | No alias | Ribosomal protein S30 family protein | 0.03 | Archaeplastida | |
| Cpa|evm.model.tig00001003.33 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | Archaeplastida | |
| Cre16.g666301 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.06 | Archaeplastida | |
| GSVIVT01016902001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | Archaeplastida | |
| Gb_23464 | No alias | component RPS30 of SSU proteome | 0.04 | Archaeplastida | |
| LOC_Os02g56014.1 | No alias | component RPS30 of SSU proteome | 0.04 | Archaeplastida | |
| LOC_Os06g07580.1 | No alias | component RPS30 of SSU proteome | 0.04 | Archaeplastida | |
| MA_10432727g0010 | No alias | component RPS30 of SSU proteome | 0.05 | Archaeplastida | |
| Mp2g24290.1 | No alias | component RPS30 of SSU proteome | 0.04 | Archaeplastida | |
| Mp8g09080.1 | No alias | component RPS30 of SSU proteome | 0.03 | Archaeplastida | |
| Pp3c1_420V3.1 | No alias | Ribosomal protein S30 family protein | 0.06 | Archaeplastida | |
| Pp3c2_29010V3.1 | No alias | Ribosomal protein S30 family protein | 0.06 | Archaeplastida | |
| Pp3c7_26650V3.1 | No alias | Ribosomal protein S30 family protein | 0.05 | Archaeplastida | |
| Solyc08g076340.3.1 | No alias | component RPS30 of SSU proteome | 0.05 | Archaeplastida | |
| Solyc12g008700.3.1 | No alias | component RPS30 of SSU proteome | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005622 | intracellular | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
| MF | GO:0003714 | transcription corepressor activity | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| BP | GO:0006405 | RNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Neighborhood |
| BP | GO:0008104 | protein localization | IEP | Neighborhood |
| CC | GO:0008250 | oligosaccharyltransferase complex | IEP | Neighborhood |
| MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
| BP | GO:0015031 | protein transport | IEP | Neighborhood |
| BP | GO:0015833 | peptide transport | IEP | Neighborhood |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Neighborhood |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
| BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
| CC | GO:0034998 | oligosaccharyltransferase I complex | IEP | Neighborhood |
| BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
| BP | GO:0042886 | amide transport | IEP | Neighborhood |
| BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
| BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
| BP | GO:0050657 | nucleic acid transport | IEP | Neighborhood |
| BP | GO:0050658 | RNA transport | IEP | Neighborhood |
| BP | GO:0051028 | mRNA transport | IEP | Neighborhood |
| BP | GO:0051168 | nuclear export | IEP | Neighborhood |
| BP | GO:0051169 | nuclear transport | IEP | Neighborhood |
| BP | GO:0051236 | establishment of RNA localization | IEP | Neighborhood |
| BP | GO:0051641 | cellular localization | IEP | Neighborhood |
| BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
| BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
| BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| CC | GO:1990234 | transferase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006846 | Ribosomal_S30 | 3 | 59 |
| No external refs found! |