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  5. AMTR_s00014p00097990

AMTR_s00014p00097990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00014.33

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor


Gene families : OG0000508 (Archaeplastida) Phylogenetic Tree(s): OG0000508_tree ,
OG_05_0000312 (LandPlants) Phylogenetic Tree(s): OG_05_0000312_tree ,
OG_06_0000484 (SeedPlants) Phylogenetic Tree(s): OG_06_0000484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00014p00097990
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AT2G18160 ATBZIP2, GBF5, bZIP2 basic leucine-zipper 2 0.03 Archaeplastida
AT5G38800 bZIP43, AtbZIP43 basic leucine-zipper 43 0.02 Archaeplastida
LOC_Os02g03960.1 No alias transcription factor (bZIP) 0.03 Archaeplastida
LOC_Os03g47200.1 No alias transcription factor (bZIP) 0.03 Archaeplastida
MA_91576g0010 No alias transcription factor (bZIP) 0.03 Archaeplastida
Solyc03g046440.3.1 No alias transcription factor (bZIP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004827 bZIP 36 94
No external refs found!