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Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TATA box-binding protein (TBP) regulation.NC2 regulator complex.beta component
Gene families : OG0000142 (Archaeplastida) Phylogenetic Tree(s): OG0000142_tree ,
OG_05_0003843 (LandPlants) Phylogenetic Tree(s): OG_05_0003843_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo227538 | |
| Cluster | HCCA: Cluster_203 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00001542.23 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.03 | Archaeplastida | |
| GSVIVT01010959001 | No alias | RNA biosynthesis.transcriptional activation.NF-Y... | 0.02 | Archaeplastida | |
| Pp3c3_14260V3.1 | No alias | nuclear factor Y, subunit B3 | 0.03 | Archaeplastida | |
| Zm00001e033623_P001 | No alias | non-catalytic component Dpb4 of DNA polymerase epsilon complex | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005929 | cilium | IEP | Neighborhood |
| BP | GO:0008593 | regulation of Notch signaling pathway | IEP | Neighborhood |
| BP | GO:0009966 | regulation of signal transduction | IEP | Neighborhood |
| BP | GO:0009967 | positive regulation of signal transduction | IEP | Neighborhood |
| MF | GO:0010011 | auxin binding | IEP | Neighborhood |
| BP | GO:0010646 | regulation of cell communication | IEP | Neighborhood |
| BP | GO:0010647 | positive regulation of cell communication | IEP | Neighborhood |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Neighborhood |
| MF | GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | IEP | Neighborhood |
| MF | GO:0016972 | thiol oxidase activity | IEP | Neighborhood |
| BP | GO:0023051 | regulation of signaling | IEP | Neighborhood |
| BP | GO:0023056 | positive regulation of signaling | IEP | Neighborhood |
| CC | GO:0031514 | motile cilium | IEP | Neighborhood |
| MF | GO:0042562 | hormone binding | IEP | Neighborhood |
| CC | GO:0042995 | cell projection | IEP | Neighborhood |
| BP | GO:0045747 | positive regulation of Notch signaling pathway | IEP | Neighborhood |
| BP | GO:0048518 | positive regulation of biological process | IEP | Neighborhood |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Neighborhood |
| BP | GO:0048583 | regulation of response to stimulus | IEP | Neighborhood |
| BP | GO:0048584 | positive regulation of response to stimulus | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| CC | GO:0120025 | plasma membrane bounded cell projection | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003958 | CBFA_NFYB_domain | 12 | 76 |
| No external refs found! |