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Heatmap: Cluster_203 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
- -4.47 -32.86 - 0.54 -1.82 -3.41 - -20.18 - -20.38 -19.25 - - - -31.57 - -0.74 - 2.39 1.89 2.33 -30.39 - 2.82 1.5 1.75 1.21 - - - -
-0.38 -0.46 -0.74 -0.46 -0.7 -0.21 -0.23 -0.39 0.05 0.03 -0.19 -0.18 0.0 -0.49 -0.35 0.51 -0.34 0.08 -0.12 0.97 0.31 0.94 0.19 0.03 1.69 -0.6 -0.91 -0.38 0.01 0.01 -0.89 -0.81
-0.69 -0.86 -0.62 -0.68 -0.55 -0.52 -0.69 -0.27 -0.3 -0.34 -0.21 -0.57 0.42 -0.36 -0.22 0.37 -0.08 0.05 0.22 -0.78 0.27 1.09 0.33 0.42 0.73 0.55 0.32 0.23 -0.26 -0.05 0.2 0.23
-1.5 -0.92 -1.13 -0.42 -0.24 0.07 -0.34 -0.33 -0.52 -1.14 -1.19 -0.96 -1.08 -0.76 -0.45 -0.71 -0.66 -0.99 -0.47 0.7 1.2 1.14 -0.19 -0.21 1.66 1.15 1.22 1.25 -0.8 -0.71 -0.96 -1.28
-0.68 -0.95 -0.73 -0.57 -0.49 -0.63 -0.55 -0.46 -0.17 -0.27 -0.24 -0.41 0.12 -0.39 0.23 0.06 -0.97 -1.81 -0.06 0.57 -0.12 1.28 -0.38 0.04 -0.26 1.74 1.08 1.03 -0.85 -0.62 -0.44 -0.36
-2.52 -2.61 -2.61 -2.07 -1.83 -2.01 -1.24 -1.53 -1.44 -1.55 -1.48 -1.65 -0.01 -1.13 -1.13 0.21 -1.4 -0.25 0.72 0.05 1.46 0.64 -1.19 -0.82 2.24 1.67 0.44 0.09 -0.25 -0.0 0.9 1.17
-0.73 -0.41 -0.16 0.23 0.56 0.52 -0.01 0.03 -0.43 -0.51 -0.55 -0.98 0.05 0.17 0.23 0.18 -0.41 -0.76 -0.07 0.52 0.41 -0.65 0.04 -0.04 0.71 0.67 0.71 0.81 -1.1 -0.97 -0.76 -0.58
-0.61 -0.41 -0.45 -0.26 -0.2 -0.28 -0.2 -0.06 -0.33 -0.19 -0.36 -0.34 0.1 -0.07 -0.04 0.33 -0.57 -0.76 0.23 -0.11 0.33 0.05 0.02 0.18 0.37 1.08 0.96 0.93 -0.29 -0.31 -0.61 -0.58
-0.44 -0.14 0.01 0.06 0.34 0.55 0.11 0.23 -0.07 -0.13 -0.16 -0.33 -0.38 -0.18 0.3 -0.01 -0.44 -0.82 0.12 -0.8 0.55 -0.23 -0.49 -0.36 0.88 0.32 0.77 0.93 -0.77 -0.77 -0.75 -0.64
-0.14 -0.22 -0.33 -0.19 -0.15 -0.07 0.14 0.29 0.33 0.27 0.17 -0.04 -0.7 -0.69 -0.73 -0.46 -0.32 -0.52 -0.45 -0.43 0.77 0.41 -0.51 -0.53 1.19 0.65 0.55 0.32 -0.37 -0.28 -0.46 -0.04
-1.21 -0.9 -0.78 -0.68 -0.85 -0.43 -0.48 -0.77 -0.91 -0.83 -1.0 -1.14 0.26 -0.37 0.39 0.45 -0.28 -0.52 -0.14 0.76 -1.43 0.79 -0.36 -0.06 0.23 1.87 1.1 1.79 -0.41 -0.36 -1.11 -2.59
-1.11 -1.15 -0.74 -0.93 -0.63 -0.85 -0.75 -0.49 -0.42 -0.67 -0.53 -0.61 0.2 -0.28 0.11 0.02 -0.7 -0.64 -0.34 0.26 1.38 1.16 -0.65 -0.37 0.83 1.47 0.97 0.71 -0.57 -0.56 -0.26 -0.22
-1.18 -0.98 -0.98 -1.02 -1.03 -0.54 -0.77 -0.35 -0.92 -1.36 -1.14 -1.53 -1.26 -1.34 -1.19 -0.76 -0.59 0.08 -0.61 1.07 0.64 1.89 -0.84 -0.77 0.62 0.84 1.88 1.56 -0.62 -0.81 -0.07 -0.11
-1.51 -1.47 -0.14 -2.12 -0.87 -1.69 -0.53 -0.84 -1.26 0.04 -1.05 -0.34 -0.34 0.8 0.57 -0.42 -0.08 -0.81 -0.21 - -0.93 -1.26 -0.56 -0.52 1.07 1.6 1.99 1.66 -0.47 0.04 -0.07 -0.13
-0.36 -0.34 -0.97 -0.41 -0.78 -0.58 -0.8 -0.19 -0.52 -0.08 -0.71 -0.5 -1.55 -0.36 -0.77 -1.17 -1.74 -3.49 -0.95 0.8 0.83 0.99 -1.72 -1.35 1.37 1.96 1.8 1.67 -1.4 -1.92 -2.25 -2.04
-0.7 -0.37 -0.31 -0.02 0.07 0.23 -0.03 -0.06 -0.09 -0.32 -0.54 -0.79 -0.34 0.24 0.16 0.04 -1.12 -0.9 0.05 -2.84 0.78 1.74 -0.58 -0.46 0.82 0.51 1.18 0.82 -1.3 -1.23 -1.36 -1.07
-0.25 -0.26 -0.17 0.18 0.48 0.38 0.12 0.02 -0.32 -0.22 -0.22 -0.46 -0.13 -0.31 -0.82 0.04 -0.47 -0.42 0.02 -1.4 1.15 -1.19 -0.27 -0.27 1.45 0.4 0.52 0.75 -0.89 -0.86 -0.61 -0.25
-0.41 -0.58 -0.67 -0.3 -0.16 -0.2 -0.16 -0.22 -0.04 -0.32 -0.37 -0.35 -0.91 -0.71 0.61 -0.46 -1.11 -0.99 -0.62 0.67 1.14 0.49 -0.43 -0.14 1.33 0.92 1.13 0.85 -0.85 -0.79 -1.14 -1.2
-1.23 -0.88 -0.55 0.34 0.75 1.05 -0.07 -0.29 0.03 -0.35 -0.45 -0.84 -0.72 -0.21 -0.21 -0.29 -1.13 -1.53 -0.43 0.14 0.89 -0.13 -0.12 0.09 1.67 0.74 1.29 0.5 -1.74 -1.42 -1.85 -1.91
0.04 -0.09 -0.4 -0.32 -0.42 -0.51 -0.15 -0.12 0.0 0.12 -0.12 -0.09 -0.83 -0.6 -0.33 -0.87 -1.39 -2.39 -0.62 0.41 0.52 0.6 -0.69 -0.55 1.28 0.88 0.86 0.72 -1.02 -1.02 1.0 0.21
-0.71 0.63 0.77 0.03 -0.72 -0.26 0.23 -0.15 0.49 -0.55 -0.1 -0.52 -0.44 -0.02 -0.39 -0.85 -0.84 -0.75 -0.49 -4.27 0.74 2.43 -0.75 -0.33 1.02 -0.24 0.37 -0.43 -1.67 -2.11 -0.95 -0.95
-0.6 -0.64 -0.45 -0.44 -0.54 -0.77 -0.15 -0.03 -0.19 0.33 -0.14 -0.26 -0.54 0.12 1.35 -0.08 -1.42 -1.05 -0.92 0.07 0.36 1.06 -1.11 -1.01 -2.35 2.71 -0.26 -0.12 -1.69 -1.73 -0.87 -0.88
-1.91 -1.39 -0.58 0.54 0.92 0.7 0.12 0.03 -0.83 -1.55 -1.3 -1.6 1.47 -0.73 1.08 1.36 -1.37 0.43 -0.99 0.27 0.45 -3.77 -0.03 0.19 1.39 -0.29 0.21 0.17 -1.88 -1.13 -2.47 -1.93
-1.22 -3.64 -3.48 -2.59 -0.95 -0.63 -1.32 -0.52 -0.73 -0.07 -0.86 -1.33 -2.16 -1.54 -1.3 -1.43 -0.44 -0.54 0.28 1.6 0.74 1.71 -1.61 -1.25 2.39 0.58 0.56 0.97 0.03 0.31 -0.39 -0.77
-0.57 -0.07 0.1 0.47 0.2 0.51 0.33 -0.02 -0.35 -0.62 -0.46 -0.64 -0.12 0.66 0.62 0.01 -0.97 -1.83 -0.51 -0.0 0.24 0.73 -0.8 -0.93 1.61 0.15 0.84 0.63 -1.45 -1.52 -1.91 -1.56
0.15 - - - -0.93 -3.41 - - - - - - -4.06 -2.06 -31.72 - -0.89 -0.33 - -4.23 2.95 3.59 - - -1.81 2.02 2.17 - -8.72 - - -11.23
-0.33 -0.17 -0.13 -0.21 -0.27 -0.02 -0.19 -0.08 -0.17 -0.16 -0.22 -0.51 -0.97 -0.87 -0.12 -0.69 -0.82 -0.94 -0.54 0.16 0.73 0.53 -0.64 -0.53 1.51 1.11 1.04 0.83 -1.04 -0.88 -0.06 -0.31
-0.36 -0.33 -0.84 -0.2 -0.25 0.27 -0.17 -0.47 -0.33 -0.83 -0.03 -0.47 0.93 -0.01 0.17 0.47 -0.38 -2.17 -0.1 -0.38 1.34 1.79 -0.53 -0.46 0.58 -0.86 0.25 -0.9 -1.04 -2.38 0.33 0.08
-1.21 -0.74 -1.58 -1.03 -0.41 -0.76 -1.18 -0.13 -0.86 -0.84 -0.54 -1.05 -0.68 -3.68 -1.34 -0.4 -0.77 -2.97 1.01 -0.44 0.33 1.69 -0.08 0.41 1.24 1.81 0.76 1.15 -0.46 -0.16 -0.34 -0.18
-1.14 -1.3 -1.11 -0.93 -0.95 -1.73 0.06 -0.12 -0.18 0.68 0.19 0.0 0.12 -1.49 -1.49 -0.29 -0.96 -5.61 -0.63 -0.94 0.48 2.11 -0.93 -0.76 0.73 1.93 0.49 0.98 -0.55 -0.62 -0.52 -0.49
-0.3 0.18 0.52 0.45 0.47 0.66 -0.02 -0.3 -0.59 -0.64 -1.02 -0.88 0.01 -0.06 0.5 0.08 -0.26 -0.44 -0.08 -0.07 -0.23 0.73 0.04 -0.04 0.82 0.07 0.49 0.62 -0.87 -0.92 -1.23 -1.08
-0.99 -1.47 -1.59 -0.27 0.91 1.1 -0.14 -0.52 -1.01 -1.01 -1.02 -1.25 0.27 -0.02 -0.56 -0.1 -0.51 -0.92 -0.36 0.6 1.26 -2.34 -0.57 -0.9 2.03 0.88 0.9 0.99 -1.38 -1.19 -1.67 -1.35
-0.15 -0.21 -0.53 -0.24 -0.41 -0.89 -0.62 -0.33 0.02 -0.26 -0.27 -0.3 -0.09 -0.15 -1.21 -0.46 -1.37 -0.57 -0.74 -0.36 0.79 0.87 -1.39 -0.87 0.58 2.36 0.96 0.67 -1.29 -1.34 -0.77 -0.02
-0.95 -0.96 -1.41 0.21 0.59 -2.11 -0.27 -0.45 -1.07 -1.92 -0.84 0.16 -3.79 -2.14 -1.89 -2.66 -2.82 - -2.91 -0.15 1.71 -0.0 -2.95 - 2.28 1.29 2.59 1.81 - -3.84 -1.52 -2.9
-0.39 0.03 0.36 0.12 0.34 0.6 0.42 -0.04 -0.31 -0.38 -0.42 -0.73 0.38 -0.02 0.71 -0.31 -0.47 -0.22 -0.09 -0.15 -0.53 -0.51 0.33 0.53 1.32 -0.56 0.35 0.23 -0.92 -0.67 -1.3 -1.28
-2.81 -3.04 - -3.54 -2.83 -2.66 -2.68 -2.18 -1.63 -2.49 -3.61 -2.78 -4.46 0.65 -0.31 -3.65 -5.17 -3.03 -2.86 1.88 1.83 0.6 -3.53 -2.72 2.98 2.0 1.48 1.76 -3.68 -3.15 -2.86 -3.92
- - - - - - - -2.55 - - -2.77 -1.85 - -2.9 -1.16 - -1.67 -2.17 - 0.33 2.08 3.06 - - -0.59 1.78 2.86 2.36 - - - -
-0.2 -0.1 0.2 0.13 -0.04 0.19 0.21 0.17 0.0 0.02 -0.12 0.04 -0.82 -0.16 0.12 -0.76 -1.61 -2.5 -1.0 0.26 1.39 -0.26 -1.09 -0.78 1.74 1.04 0.27 0.53 -1.43 -1.18 -1.25 -1.08
-2.01 -3.81 -4.28 -4.14 -2.32 -3.85 -3.06 -3.48 -1.6 -3.92 -2.72 -6.04 -2.39 0.59 0.61 -1.07 -2.82 -4.27 -2.41 0.43 1.2 0.56 -2.98 -2.76 2.2 2.24 2.45 2.52 -2.29 -2.66 -3.45 -3.84
-0.23 -0.63 -0.45 -0.6 -0.19 -0.34 -0.47 -0.25 -0.11 -0.37 -0.1 -0.37 -0.16 -0.52 -0.67 0.1 -0.53 -1.03 0.17 1.24 0.46 1.2 -0.42 -0.19 0.23 0.96 0.37 0.44 -0.46 -0.33 -0.1 -0.03
-0.54 -0.94 -1.05 -0.76 -0.47 -0.89 -0.7 -0.5 -0.27 -0.25 -0.26 -0.33 0.07 -1.08 -1.2 -0.03 -0.87 -1.32 0.57 0.74 0.8 1.14 -0.49 0.37 0.44 1.27 0.97 0.49 -0.82 -0.66 -0.07 0.63
-0.76 -0.95 -1.13 -1.05 -1.1 -1.39 -1.15 -0.77 -0.36 -0.26 -0.06 -0.23 0.6 -2.05 -3.18 0.24 -0.89 -1.4 0.3 0.49 1.07 -0.83 0.06 0.16 2.08 1.77 -0.97 -1.23 -0.46 -0.52 0.42 0.9
-1.51 -1.47 -3.34 -2.12 -2.19 -1.92 -1.88 -1.7 -0.74 -0.39 -0.91 -0.61 0.5 -0.9 -0.85 0.12 -1.22 -0.65 -0.41 -1.23 1.57 1.51 -0.58 -0.26 2.1 1.83 1.11 0.07 -0.75 -0.49 -0.5 0.17
-0.4 -0.98 -0.91 -0.66 -0.6 -0.73 -0.75 -0.4 -0.48 -0.28 0.12 -0.5 -0.5 -1.76 -0.52 -0.19 -1.05 -0.73 0.02 -0.2 0.8 1.1 -0.36 0.01 1.13 1.8 1.02 0.92 -0.71 -0.73 -0.52 -0.16
0.02 -0.12 -0.37 -0.04 -0.13 0.14 -0.16 0.14 -0.02 0.12 0.04 -0.19 -0.53 -0.69 -0.09 -0.19 -0.01 -1.24 -0.06 -0.36 0.41 0.05 -0.31 -0.16 0.51 0.5 0.62 0.6 -0.18 -0.17 0.29 0.12
-16.07 -3.15 -2.85 -5.67 - -0.06 -3.09 -3.92 -3.78 -20.19 -4.07 - -0.85 -1.35 -0.15 -1.25 -1.56 -3.48 -0.51 - 1.54 1.15 -1.22 -1.88 2.43 2.2 2.4 2.21 -0.72 -0.99 -4.04 -2.57
0.21 -0.31 -0.52 -0.48 -0.74 -0.4 -0.71 -0.53 -0.26 -0.13 0.09 0.16 -0.52 -0.44 -0.35 -0.34 -0.84 -0.72 0.25 -0.22 0.55 0.52 -0.58 -0.47 1.15 1.07 0.37 0.12 -0.53 -0.55 0.79 0.76
-0.91 -0.47 -0.36 0.05 0.46 0.57 0.55 0.49 0.02 -0.46 -0.57 -0.68 -0.36 -1.02 0.55 -0.19 -0.67 -1.73 -0.1 -0.1 0.06 1.32 -0.54 -0.52 1.37 0.44 0.6 0.32 -0.83 -0.56 -1.01 -1.38

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.