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  5. Smo227897

Smo227897


Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-1 component


Gene families : OG0004585 (Archaeplastida) Phylogenetic Tree(s): OG0004585_tree ,
OG_05_0006234 (LandPlants) Phylogenetic Tree(s): OG_05_0006234_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo227897
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00199560 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.02 Archaeplastida
Cpa|evm.model.tig00001098.5 No alias Protein degradation.26S proteasome.20S core... 0.02 Archaeplastida
Cre06.g279000 No alias Protein degradation.26S proteasome.20S core... 0.05 Archaeplastida
Cre12.g531100 No alias Protein degradation.26S proteasome.20S core... 0.05 Archaeplastida
GSVIVT01032253001 No alias Protein degradation.26S proteasome.20S core... 0.04 Archaeplastida
LOC_Os02g53060.1 No alias component beta type-1 of 26S proteasome 0.08 Archaeplastida
LOC_Os06g04800.1 No alias component beta type-1 of 26S proteasome 0.03 Archaeplastida
Mp6g09980.1 No alias component beta type-1 of 26S proteasome 0.05 Archaeplastida
Pp3c18_17380V3.1 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.06 Archaeplastida
Zm00001e029965_P002 No alias component beta type-1 of 26S proteasome 0.05 Archaeplastida
Zm00001e036550_P001 No alias component beta type-1 of 26S proteasome 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0045926 negative regulation of growth IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 16 196
No external refs found!