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  5. AMTR_s00014p00111690

AMTR_s00014p00111690 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00014.39

Description : AAA-ATPase At3g28600 OS=Arabidopsis thaliana


Gene families : OG0000095 (Archaeplastida) Phylogenetic Tree(s): OG0000095_tree ,
OG_05_0000059 (LandPlants) Phylogenetic Tree(s): OG_05_0000059_tree ,
OG_06_0003021 (SeedPlants) Phylogenetic Tree(s): OG_06_0003021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00014p00111690
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AT2G18190 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
AT5G17740 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
LOC_Os12g28137.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os12g28177.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os12g28590.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os12g44210.1 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 Archaeplastida
Smo75451 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!