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Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS15a component
Gene families : OG0001596 (Archaeplastida) Phylogenetic Tree(s): OG0001596_tree ,
OG_05_0001709 (LandPlants) Phylogenetic Tree(s): OG_05_0001709_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo228163 | |
| Cluster | HCCA: Cluster_88 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00192110 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.1 | Archaeplastida | |
| AT1G07770 | RPS15A | ribosomal protein S15A | 0.12 | Archaeplastida | |
| AT3G46040 | RPS15AD | ribosomal protein S15A D | 0.12 | Archaeplastida | |
| AT5G59850 | No alias | Ribosomal protein S8 family protein | 0.16 | Archaeplastida | |
| Cpa|evm.model.tig00000158.110 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.13 | Archaeplastida | |
| Cre05.g234637 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.13 | Archaeplastida | |
| GSVIVT01016595001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.12 | Archaeplastida | |
| GSVIVT01025622001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | Archaeplastida | |
| Gb_08537 | No alias | component RPS15a of SSU proteome | 0.08 | Archaeplastida | |
| LOC_Os02g27760.1 | No alias | component RPS15a of SSU proteome | 0.13 | Archaeplastida | |
| LOC_Os07g10720.1 | No alias | component RPS15a of SSU proteome | 0.14 | Archaeplastida | |
| MA_10427318g0020 | No alias | component RPS15a of SSU proteome | 0.09 | Archaeplastida | |
| MA_57835g0010 | No alias | component RPS15a of SSU proteome | 0.1 | Archaeplastida | |
| MA_82191g0010 | No alias | component RPS15a of SSU proteome | 0.09 | Archaeplastida | |
| Mp8g06510.1 | No alias | component RPS15a of SSU proteome | 0.18 | Archaeplastida | |
| Mp8g13010.1 | No alias | component RPS15a of SSU proteome | 0.2 | Archaeplastida | |
| Pp3c11_10490V3.1 | No alias | Ribosomal protein S8 family protein | 0.09 | Archaeplastida | |
| Pp3c1_4290V3.1 | No alias | Ribosomal protein S8 family protein | 0.12 | Archaeplastida | |
| Pp3c2_32050V3.1 | No alias | Ribosomal protein S8 family protein | 0.13 | Archaeplastida | |
| Pp3c3_1140V3.1 | No alias | ribosomal protein S15A | 0.09 | Archaeplastida | |
| Pp3c4_27540V3.1 | No alias | Ribosomal protein S8 family protein | 0.15 | Archaeplastida | |
| Pp3c5_5750V3.1 | No alias | ribosomal protein S15A | 0.1 | Archaeplastida | |
| Solyc04g150158.1.1 | No alias | component RPS15a of SSU proteome | 0.12 | Archaeplastida | |
| Zm00001e016394_P001 | No alias | component RPS15a of SSU proteome | 0.15 | Archaeplastida | |
| Zm00001e024375_P001 | No alias | no hits & (original description: none) | 0.15 | Archaeplastida | |
| Zm00001e026115_P001 | No alias | component RPS15a of SSU proteome | 0.11 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005622 | intracellular | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| CC | GO:0005759 | mitochondrial matrix | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006457 | protein folding | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0007034 | vacuolar transport | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Neighborhood |
| CC | GO:0016021 | integral component of membrane | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| CC | GO:0019867 | outer membrane | IEP | Neighborhood |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Neighborhood |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000630 | Ribosomal_S8 | 7 | 130 |
| No external refs found! |