Smo228208

Description : Protein translocation.endoplasmic reticulum.co-translational insertion system.Sec61 subcomplex.gamma subunit

Gene families : OG0003149 (Archaeplastida) Phylogenetic Tree(s): OG0003149_tree ,
OG_05_0003036 (LandPlants) Phylogenetic Tree(s): OG_05_0003036_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo228208
Cluster	HCCA: Cluster_113

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00046010	evm_27.TU.AmTr_v1...	Protein translocation.endoplasmic...	0.03	Archaeplastida
AT3G48570	No alias	secE/sec61-gamma protein transport protein	0.02	Archaeplastida
AT5G50460	No alias	secE/sec61-gamma protein transport protein	0.03	Archaeplastida
Cpa\|evm.model.tig00000980.10	No alias	Protein translocation.endoplasmic...	0.02	Archaeplastida
GSVIVT01033084001	No alias	Protein translocation.endoplasmic...	0.03	Archaeplastida
LOC_Os02g08180.1	No alias	subunit gamma of co-translational insertion system Sec61...	0.06	Archaeplastida
LOC_Os06g44374.1	No alias	subunit gamma of co-translational insertion system Sec61...	0.05	Archaeplastida
MA_10431451g0010	No alias	subunit gamma of co-translational insertion system Sec61...	0.03	Archaeplastida
MA_27783g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Pp3c18_13150V3.1	No alias	secE/sec61-gamma protein transport protein	0.02	Archaeplastida
Pp3c19_3570V3.1	No alias	secE/sec61-gamma protein transport protein	0.06	Archaeplastida
Pp3c3_26940V3.1	No alias	secE/sec61-gamma protein transport protein	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
MF	GO:0003712	transcription coregulator activity	IEP	Neighborhood
MF	GO:0003714	transcription corepressor activity	IEP	Neighborhood
MF	GO:0003735	structural constituent of ribosome	IEP	Neighborhood
MF	GO:0005198	structural molecule activity	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005622	intracellular	IEP	Neighborhood
BP	GO:0006405	RNA export from nucleus	IEP	Neighborhood
BP	GO:0006406	mRNA export from nucleus	IEP	Neighborhood
BP	GO:0006412	translation	IEP	Neighborhood
BP	GO:0006457	protein folding	IEP	Neighborhood
BP	GO:0006825	copper ion transport	IEP	Neighborhood
BP	GO:0006913	nucleocytoplasmic transport	IEP	Neighborhood
CC	GO:0008250	oligosaccharyltransferase complex	IEP	Neighborhood
BP	GO:0009059	macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0015931	nucleobase-containing compound transport	IEP	Neighborhood
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Neighborhood
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Neighborhood
BP	GO:0032774	RNA biosynthetic process	IEP	Neighborhood
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Neighborhood
CC	GO:0034998	oligosaccharyltransferase I complex	IEP	Neighborhood
BP	GO:0042254	ribosome biogenesis	IEP	Neighborhood
BP	GO:0044085	cellular component biogenesis	IEP	Neighborhood
BP	GO:0044249	cellular biosynthetic process	IEP	Neighborhood
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
BP	GO:0050657	nucleic acid transport	IEP	Neighborhood
BP	GO:0050658	RNA transport	IEP	Neighborhood
BP	GO:0051028	mRNA transport	IEP	Neighborhood
BP	GO:0051168	nuclear export	IEP	Neighborhood
BP	GO:0051169	nuclear transport	IEP	Neighborhood
BP	GO:0051236	establishment of RNA localization	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
CC	GO:1990234	transferase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001901	Translocase_SecE/Sec61-g	12	65

External Links

No external refs found!

Smo228208

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation