Smo233433

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter

Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0034201 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo233433
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00048p00046670	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01021365001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Gb_13906	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_33057	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_33058	No alias	subfamily ABCB transporter	0.03	Archaeplastida
MA_111099g0010	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Mp2g11920.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Pp3c17_16450V3.1	No alias	ATP binding cassette subfamily B19	0.02	Archaeplastida
Solyc07g064120.2.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Zm00001e006786_P002	No alias	no hits & (original description: none)	0.01	Archaeplastida
Zm00001e023274_P001	No alias	subfamily ABCB transporter	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
CC	GO:0042765	GPI-anchor transamidase complex	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	365	513

External Links

No external refs found!

Smo233433

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation