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  5. AMTR_s00014p00241930

AMTR_s00014p00241930 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00014.112

Description : Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana


Gene families : OG0000095 (Archaeplastida) Phylogenetic Tree(s): OG0000095_tree ,
OG_05_0000059 (LandPlants) Phylogenetic Tree(s): OG_05_0000059_tree ,
OG_06_0001890 (SeedPlants) Phylogenetic Tree(s): OG_06_0001890_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00014p00241930
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00244450 evm_27.TU.AmTr_v1... AAA-ATPase At3g28510 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G28510 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
AT3G28540 No alias P-loop containing nucleoside triphosphate hydrolases... 0.07 Archaeplastida
AT3G50930 BCS1 cytochrome BC1 synthesis 0.03 Archaeplastida
AT4G05340 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT5G40000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT5G40010 AATP1 AAA-ATPase 1 0.06 Archaeplastida
GSVIVT01008088001 No alias AAA-ATPase At3g28540 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01010371001 No alias AAA-ATPase At5g17760 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01018890001 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01029545001 No alias AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01032552001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01032553001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01032554001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01032556001 No alias No description available 0.03 Archaeplastida
GSVIVT01032557001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_27547 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_34238 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g19260.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g40140.1 No alias AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g02330.1 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os03g38800.1 No alias AAA-ATPase At5g17740 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os03g58800.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os06g48250.1 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os07g09470.1 No alias AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g27340.1 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g24320.1 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g28550.1 No alias AAA-ATPase At5g40000 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g28590.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os12g44190.1 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10436428g0010 No alias AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_161279g0020 No alias AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_165229g0020 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_344969g0010 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_56516g0010 No alias AAA-ATPase At3g28570, mitochondrial OS=Arabidopsis... 0.03 Archaeplastida
MA_604139g0010 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_69227g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c12_21960V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Pp3c8_710V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
Solyc01g096230.4.1 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g062550.3.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.02 Archaeplastida
Solyc02g087540.3.1 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g033790.4.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.05 Archaeplastida
Solyc03g033840.4.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.05 Archaeplastida
Solyc03g082640.3.1 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc05g007470.4.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc10g007280.4.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 Archaeplastida
Solyc12g055810.1.1 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e003357_P001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e011416_P001 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e012527_P001 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e013138_P001 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e020637_P001 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e027961_P001 No alias AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e038158_P001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005231 excitatory extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0030288 outer membrane-bounded periplasmic space IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
CC GO:0042597 periplasmic space IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 28 122
IPR003959 ATPase_AAA_core 246 376
No external refs found!