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  5. Smo266532

Smo266532


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RACK1 associated component


Gene families : OG0002844 (Archaeplastida) Phylogenetic Tree(s): OG0002844_tree ,
OG_05_0002983 (LandPlants) Phylogenetic Tree(s): OG_05_0002983_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo266532
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00058690 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
AT1G18080 ATARCA, RACK1A, RACK1A_AT Transducin/WD40 repeat-like superfamily protein 0.06 Archaeplastida
AT1G48630 RACK1B_AT receptor for activated C kinase 1B 0.18 Archaeplastida
AT3G18130 RACK1C_AT receptor for activated C kinase 1C 0.18 Archaeplastida
Cpa|evm.model.tig00000169.6 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
Cre06.g278222 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.13 Archaeplastida
GSVIVT01008395001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 Archaeplastida
Gb_33900 No alias associated component RACK1 of SSU proteome 0.03 Archaeplastida
LOC_Os01g49290.1 No alias associated component RACK1 of SSU proteome 0.13 Archaeplastida
LOC_Os05g47890.1 No alias associated component RACK1 of SSU proteome 0.05 Archaeplastida
MA_10435947g0010 No alias Guanine nucleotide-binding protein subunit beta-like... 0.07 Archaeplastida
Mp3g15630.1 No alias associated component RACK1 of SSU proteome 0.24 Archaeplastida
Pp3c16_13180V3.1 No alias receptor for activated C kinase 1B 0.08 Archaeplastida
Pp3c27_6040V3.1 No alias receptor for activated C kinase 1B 0.11 Archaeplastida
Pp3c5_770V3.1 No alias receptor for activated C kinase 1B 0.14 Archaeplastida
Solyc03g119040.3.1 No alias associated component RACK1 of SSU proteome 0.13 Archaeplastida
Solyc06g069010.3.1 No alias associated component RACK1 of SSU proteome 0.14 Archaeplastida
Zm00001e026456_P001 No alias associated component RACK1 of SSU proteome 0.18 Archaeplastida
Zm00001e032340_P001 No alias associated component RACK1 of SSU proteome 0.18 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 238 264
No external refs found!