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  5. Smo266803

Smo266803


Description : Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase


Gene families : OG0000898 (Archaeplastida) Phylogenetic Tree(s): OG0000898_tree ,
OG_05_0001833 (LandPlants) Phylogenetic Tree(s): OG_05_0001833_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo266803
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00150410 evm_27.TU.AmTr_v1... Carbohydrate metabolism.nucleotide sugar... 0.03 Archaeplastida
AT1G53500 ATRHM2, RHM2,... NAD-dependent epimerase/dehydratase family protein 0.03 Archaeplastida
Cpa|evm.model.tig00021464.17 No alias Trifunctional UDP-glucose... 0.03 Archaeplastida
Cre02.g083800 No alias Trifunctional UDP-glucose... 0.04 Archaeplastida
Gb_07837 No alias UDP-L-rhamnose synthase 0.02 Archaeplastida
Mp1g04880.1 No alias UDP-L-rhamnose synthase 0.05 Archaeplastida
Mp6g02720.1 No alias UDP-L-rhamnose synthase 0.04 Archaeplastida
Pp3c5_10340V3.1 No alias rhamnose biosynthesis 1 0.02 Archaeplastida
Solyc08g080140.4.1 No alias UDP-L-rhamnose synthase 0.03 Archaeplastida
Solyc10g007480.4.1 No alias UDP-L-rhamnose synthase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR029903 RmlD-like-bd 387 562
No external refs found!