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  5. Smo267212

Smo267212


Description : Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-arabinose synthesis.UDP-D-xylose 4-epimerase


Gene families : OG0002773 (Archaeplastida) Phylogenetic Tree(s): OG0002773_tree ,
OG_05_0002390 (LandPlants) Phylogenetic Tree(s): OG_05_0002390_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo267212
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AT1G30620 MUR4, UXE1, HSR8 NAD(P)-binding Rossmann-fold superfamily protein 0.03 Archaeplastida
LOC_Os04g52730.1 No alias UDP-D-xylose 4-epimerase 0.03 Archaeplastida
Zm00001e006920_P001 No alias UDP-D-xylose 4-epimerase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0050662 coenzyme binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004107 chorismate synthase activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 51 312
No external refs found!