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Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7a component
Gene families : OG0002306 (Archaeplastida) Phylogenetic Tree(s): OG0002306_tree ,
OG_05_0002050 (LandPlants) Phylogenetic Tree(s): OG_05_0002050_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo270545 | |
| Cluster | HCCA: Cluster_180 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00047p00140240 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.16 | Archaeplastida | |
| AT2G47610 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.24 | Archaeplastida | |
| AT3G62870 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.25 | Archaeplastida | |
| Cpa|evm.model.tig00000128.22 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.22 | Archaeplastida | |
| Cre12.g529651 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.09 | Archaeplastida | |
| GSVIVT01008585001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.18 | Archaeplastida | |
| GSVIVT01033050001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.15 | Archaeplastida | |
| GSVIVT01036540001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.19 | Archaeplastida | |
| Gb_36761 | No alias | component RPL7a of LSU proteome component | 0.17 | Archaeplastida | |
| Gb_36922 | No alias | component RPL7a of LSU proteome component | 0.09 | Archaeplastida | |
| LOC_Os08g23710.1 | No alias | component RPL7a of LSU proteome component | 0.14 | Archaeplastida | |
| LOC_Os09g32976.1 | No alias | component RPL7a of LSU proteome component | 0.2 | Archaeplastida | |
| MA_109678g0010 | No alias | component RPL7a of LSU proteome component | 0.18 | Archaeplastida | |
| MA_648702g0010 | No alias | component RPL7a of LSU proteome component | 0.03 | Archaeplastida | |
| Mp2g23250.1 | No alias | component RPL7a of LSU proteome component | 0.25 | Archaeplastida | |
| Mp8g17650.1 | No alias | component RPL7a of LSU proteome component | 0.26 | Archaeplastida | |
| Pp3c13_24420V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.18 | Archaeplastida | |
| Pp3c13_24450V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.16 | Archaeplastida | |
| Pp3c15_290V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.26 | Archaeplastida | |
| Pp3c26_330V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.25 | Archaeplastida | |
| Pp3c26_360V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.27 | Archaeplastida | |
| Pp3c9_380V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.21 | Archaeplastida | |
| Solyc01g097760.3.1 | No alias | component RPL7a of LSU proteome component | 0.06 | Archaeplastida | |
| Solyc06g050120.3.1 | No alias | component RPL7a of LSU proteome component | 0.12 | Archaeplastida | |
| Solyc06g064460.4.1 | No alias | component RPL7a of LSU proteome component | 0.02 | Archaeplastida | |
| Solyc06g064470.4.1 | No alias | no hits & (original description: none) | 0.08 | Archaeplastida | |
| Zm00001e003683_P001 | No alias | no hits & (original description: none) | 0.18 | Archaeplastida | |
| Zm00001e010129_P001 | No alias | component RPL7a of LSU proteome component | 0.19 | Archaeplastida | |
| Zm00001e034633_P002 | No alias | component RPL7a of LSU proteome component | 0.21 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005622 | intracellular | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| BP | GO:0006465 | signal peptide processing | IEP | Neighborhood |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | Neighborhood |
| BP | GO:0007017 | microtubule-based process | IEP | Neighborhood |
| BP | GO:0007018 | microtubule-based movement | IEP | Neighborhood |
| BP | GO:0007034 | vacuolar transport | IEP | Neighborhood |
| CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
| BP | GO:0016485 | protein processing | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| CC | GO:0030008 | TRAPP complex | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0051604 | protein maturation | IEP | Neighborhood |
| CC | GO:0099023 | tethering complex | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004038 | Ribosomal_L7Ae/L30e/S12e/Gad45 | 126 | 211 |
| No external refs found! |