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  5. Smo271584

Smo271584


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS24 component


Gene families : OG0002123 (Archaeplastida) Phylogenetic Tree(s): OG0002123_tree ,
OG_05_0001922 (LandPlants) Phylogenetic Tree(s): OG_05_0001922_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo271584
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00193110 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
AMTR_s00056p00221450 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
AT3G04920 No alias Ribosomal protein S24e family protein 0.24 Archaeplastida
AT5G28060 No alias Ribosomal protein S24e family protein 0.19 Archaeplastida
Cpa|evm.model.tig00000361.64 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
Cre10.g456200 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
GSVIVT01001167001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
GSVIVT01021860001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.17 Archaeplastida
Gb_38272 No alias component RPS24 of SSU proteome 0.09 Archaeplastida
LOC_Os01g52490.1 No alias component RPS24 of SSU proteome 0.1 Archaeplastida
LOC_Os02g13530.1 No alias component RPS24 of SSU proteome 0.21 Archaeplastida
LOC_Os06g36160.1 No alias component RPS24 of SSU proteome 0.15 Archaeplastida
MA_119841g0010 No alias component RPS24 of SSU proteome 0.14 Archaeplastida
Mp1g10680.1 No alias component RPS24 of SSU proteome 0.25 Archaeplastida
Pp3c12_10760V3.1 No alias Ribosomal protein S24e family protein 0.15 Archaeplastida
Pp3c12_10870V3.1 No alias Ribosomal protein S24e family protein 0.06 Archaeplastida
Pp3c13_22220V3.1 No alias Ribosomal protein S24e family protein 0.14 Archaeplastida
Pp3c3_19700V3.1 No alias Ribosomal protein S24e family protein 0.1 Archaeplastida
Pp3c4_16900V3.1 No alias Ribosomal protein S24e family protein 0.03 Archaeplastida
Pp3c4_16903V3.1 No alias Ribosomal protein S24e family protein 0.03 Archaeplastida
Solyc01g097870.3.1 No alias component RPS24 of SSU proteome 0.1 Archaeplastida
Solyc06g084230.3.1 No alias component RPS24 of SSU proteome 0.12 Archaeplastida
Solyc09g065330.3.1 No alias component RPS24 of SSU proteome 0.07 Archaeplastida
Zm00001e014422_P002 No alias component RPS24 of SSU proteome 0.17 Archaeplastida
Zm00001e019937_P001 No alias component RPS24 of SSU proteome 0.14 Archaeplastida
Zm00001e028203_P001 No alias component RPS24 of SSU proteome 0.2 Archaeplastida
Zm00001e030668_P001 No alias component RPS24 of SSU proteome 0.11 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0030008 TRAPP complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001976 Ribosomal_S24e 25 103
No external refs found!