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  5. AMTR_s00015p00133310

AMTR_s00015p00133310 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00015.30

Description : Solute transport.channels.SLAC anion channel


Gene families : OG0000580 (Archaeplastida) Phylogenetic Tree(s): OG0000580_tree ,
OG_05_0000351 (LandPlants) Phylogenetic Tree(s): OG_05_0000351_tree ,
OG_06_0006970 (SeedPlants) Phylogenetic Tree(s): OG_06_0006970_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00015p00133310
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT1G12480 RCD3, CDI3, SLAC1, OZS1 C4-dicarboxylate transporter/malic acid transport protein 0.03 Archaeplastida
AT1G62262 SLAH4 SLAC1 homologue 4 0.02 Archaeplastida
AT4G27970 SLAH2 SLAC1 homologue 2 0.04 Archaeplastida
LOC_Os01g14520.1 No alias anion channel (SLAC) 0.03 Archaeplastida
LOC_Os01g28840.1 No alias anion channel (SLAC) 0.03 Archaeplastida
MA_301724g0010 No alias anion channel (SLAC) 0.02 Archaeplastida
Solyc03g031590.4.1 No alias anion channel (SLAC) 0.02 Archaeplastida
Solyc06g036440.2.1 No alias anion channel (SLAC) 0.03 Archaeplastida
Zm00001e016340_P001 No alias anion channel (SLAC) 0.03 Archaeplastida
Zm00001e018250_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004695 Voltage-dep_anion_channel 45 351
No external refs found!