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  5. AMTR_s00015p00219560

AMTR_s00015p00219560 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00015.70

No description available


Gene families : OG0000166 (Archaeplastida) Phylogenetic Tree(s): OG0000166_tree ,
OG_05_0000070 (LandPlants) Phylogenetic Tree(s): OG_05_0000070_tree ,
OG_06_0000023 (SeedPlants) Phylogenetic Tree(s): OG_06_0000023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00015p00219560
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00205930 No alias No description available 0.03 Archaeplastida
AMTR_s00004p00044490 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00023p00023350 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00045p00047860 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00089p00084560 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00141p00014410 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s03041p00003580 No alias No description available 0.03 Archaeplastida
AMTR_s04858p00003360 No alias No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
MF GO:0004813 alanine-tRNA ligase activity IEP Neighborhood
BP GO:0006419 alanyl-tRNA aminoacylation IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!