Smo403458

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor

Gene families : OG0012615 (Archaeplastida) Phylogenetic Tree(s): OG0012615_tree ,
OG_05_0012430 (LandPlants) Phylogenetic Tree(s): OG_05_0012430_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo403458
Cluster	HCCA: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method	Actions
Smo432649	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Neighborhood
BP	GO:0001897	cytolysis by symbiont of host cells	IEP	Neighborhood
BP	GO:0001906	cell killing	IEP	Neighborhood
BP	GO:0001907	killing by symbiont of host cells	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
BP	GO:0019835	cytolysis	IEP	Neighborhood
BP	GO:0019836	hemolysis by symbiont of host erythrocytes	IEP	Neighborhood
BP	GO:0031640	killing of cells of other organism	IEP	Neighborhood
BP	GO:0035821	modification of morphology or physiology of other organism	IEP	Neighborhood
BP	GO:0044003	modification by symbiont of host morphology or physiology	IEP	Neighborhood
BP	GO:0044004	disruption by symbiont of host cell	IEP	Neighborhood
BP	GO:0044179	hemolysis in other organism	IEP	Neighborhood
BP	GO:0044364	disruption of cells of other organism	IEP	Neighborhood
BP	GO:0044419	interspecies interaction between organisms	IEP	Neighborhood
BP	GO:0044764	multi-organism cellular process	IEP	Neighborhood
BP	GO:0051701	interaction with host	IEP	Neighborhood
BP	GO:0051704	multi-organism process	IEP	Neighborhood
BP	GO:0051715	cytolysis in other organism	IEP	Neighborhood
BP	GO:0051801	cytolysis in other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0051817	modification of morphology or physiology of other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0051818	disruption of cells of other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0051883	killing of cells in other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0052331	hemolysis in other organism involved in symbiotic interaction	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	150	188

External Links

No external refs found!

Smo403458

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation