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  5. Smo403930

Smo403930


Description : Cell cycle.interphase.DNA replication.preinitiation.CDT1 helicase auxiliary factor


Gene families : OG0002838 (Archaeplastida) Phylogenetic Tree(s): OG0002838_tree ,
OG_05_0002106 (LandPlants) Phylogenetic Tree(s): OG_05_0002106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo403930
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00068790 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA replication.preinitiation.CDT1... 0.05 Archaeplastida
AT3G54710 CDT1B, CDT1, ATCDT1B homolog of yeast CDT1 B homolog of yeast CDT1 B 0.05 Archaeplastida
GSVIVT01024251001 No alias Cell cycle.interphase.DNA replication.preinitiation.CDT1... 0.03 Archaeplastida
GSVIVT01028303001 No alias Cell cycle.interphase.DNA replication.preinitiation.CDT1... 0.05 Archaeplastida
Gb_39165 No alias helicase auxiliary factor (CDT1) 0.07 Archaeplastida
LOC_Os10g34820.2 No alias helicase auxiliary factor (CDT1) 0.04 Archaeplastida
MA_9011g0010 No alias helicase auxiliary factor (CDT1) 0.05 Archaeplastida
Pp3c19_14181V3.1 No alias homolog of yeast CDT1 B homolog of yeast CDT1 B 0.03 Archaeplastida
Pp3c22_17580V3.1 No alias homolog of yeast CDT1 A 0.02 Archaeplastida
Solyc03g019960.3.1 No alias helicase auxiliary factor (CDT1) 0.06 Archaeplastida
Zm00001e004505_P001 No alias helicase auxiliary factor (CDT1) 0.08 Archaeplastida
Zm00001e036500_P001 No alias helicase auxiliary factor (CDT1) 0.03 Archaeplastida
Zm00001e041798_P001 No alias helicase auxiliary factor (CDT1) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
MF GO:0030145 manganese ion binding SpeciesIEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR032054 Cdt1_C 317 405
No external refs found!