Coexpression cluster: Cluster_137 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901363 heterocyclic compound binding 15.04% (20/133) 1.74 2e-06 0.000221
GO:0097159 organic cyclic compound binding 15.04% (20/133) 1.74 2e-06 0.000221
GO:0005488 binding 24.06% (32/133) 1.03 5.7e-05 0.003999
GO:0090304 nucleic acid metabolic process 5.26% (7/133) 2.6 0.000168 0.008771
GO:0000049 tRNA binding 1.5% (2/133) 6.07 0.000349 0.014604
GO:0032553 ribonucleotide binding 6.77% (9/133) 1.82 0.001076 0.016065
GO:0097367 carbohydrate derivative binding 6.77% (9/133) 1.79 0.001264 0.016505
GO:0005524 ATP binding 6.02% (8/133) 1.94 0.0012 0.016725
GO:0006139 nucleobase-containing compound metabolic process 5.26% (7/133) 2.15 0.001059 0.017034
GO:0006364 rRNA processing 1.5% (2/133) 4.8 0.002244 0.017367
GO:0016072 rRNA metabolic process 1.5% (2/133) 4.8 0.002244 0.017367
GO:0030554 adenyl nucleotide binding 6.02% (8/133) 1.85 0.001764 0.01756
GO:0006725 cellular aromatic compound metabolic process 5.26% (7/133) 2.03 0.00171 0.017869
GO:0017076 purine nucleotide binding 6.77% (9/133) 1.83 0.001042 0.01814
GO:0043229 intracellular organelle 3.01% (4/133) 2.93 0.00192 0.018236
GO:1901360 organic cyclic compound metabolic process 5.26% (7/133) 1.97 0.002195 0.018351
GO:0035639 purine ribonucleoside triphosphate binding 6.77% (9/133) 1.9 0.000717 0.018729
GO:0043167 ion binding 9.77% (13/133) 1.36 0.001709 0.018795
GO:0046483 heterocycle metabolic process 5.26% (7/133) 1.98 0.002075 0.018853
GO:0036094 small molecule binding 7.52% (10/133) 1.75 0.000814 0.018897
GO:0043226 organelle 3.01% (4/133) 2.88 0.00217 0.018898
GO:0003676 nucleic acid binding 7.52% (10/133) 1.73 0.000905 0.018911
GO:0016070 RNA metabolic process 3.76% (5/133) 2.42 0.002538 0.018946
GO:0032555 purine ribonucleotide binding 6.77% (9/133) 1.83 0.001008 0.019148
GO:0043168 anion binding 6.77% (9/133) 1.62 0.002708 0.019515
GO:1901265 nucleoside phosphate binding 7.52% (10/133) 1.79 0.000654 0.01953
GO:0000166 nucleotide binding 7.52% (10/133) 1.79 0.000654 0.01953
GO:0032559 adenyl ribonucleotide binding 6.02% (8/133) 1.86 0.001706 0.019806
GO:0008144 drug binding 6.02% (8/133) 1.87 0.001621 0.019926
GO:0034641 cellular nitrogen compound metabolic process 5.26% (7/133) 1.88 0.003035 0.021145
GO:0005634 nucleus 2.26% (3/133) 3.25 0.003916 0.026399
GO:0008612 peptidyl-lysine modification to peptidyl-hypusine 0.75% (1/133) 7.39 0.005968 0.030423
GO:0007059 chromosome segregation 0.75% (1/133) 7.39 0.005968 0.030423
GO:0018205 peptidyl-lysine modification 0.75% (1/133) 7.39 0.005968 0.030423
GO:0000469 cleavage involved in rRNA processing 0.75% (1/133) 7.39 0.005968 0.030423
GO:0019238 cyclohydrolase activity 0.75% (1/133) 7.39 0.005968 0.030423
GO:0003937 IMP cyclohydrolase activity 0.75% (1/133) 7.39 0.005968 0.030423
GO:0090305 nucleic acid phosphodiester bond hydrolysis 0.75% (1/133) 7.39 0.005968 0.030423
GO:0005730 nucleolus 0.75% (1/133) 7.39 0.005968 0.030423
GO:0090501 RNA phosphodiester bond hydrolysis 0.75% (1/133) 7.39 0.005968 0.030423
GO:0034470 ncRNA processing 1.5% (2/133) 4.07 0.00626 0.031152
GO:0008064 regulation of actin polymerization or depolymerization 0.75% (1/133) 6.39 0.011901 0.032728
GO:0043244 regulation of protein complex disassembly 0.75% (1/133) 6.39 0.011901 0.032728
GO:0043254 regulation of protein complex assembly 0.75% (1/133) 6.39 0.011901 0.032728
GO:0030832 regulation of actin filament length 0.75% (1/133) 6.39 0.011901 0.032728
GO:0030833 regulation of actin filament polymerization 0.75% (1/133) 6.39 0.011901 0.032728
GO:0031333 negative regulation of protein complex assembly 0.75% (1/133) 6.39 0.011901 0.032728
GO:0032272 negative regulation of protein polymerization 0.75% (1/133) 6.39 0.011901 0.032728
GO:0032535 regulation of cellular component size 0.75% (1/133) 6.39 0.011901 0.032728
GO:0032956 regulation of actin cytoskeleton organization 0.75% (1/133) 6.39 0.011901 0.032728
GO:0032970 regulation of actin filament-based process 0.75% (1/133) 6.39 0.011901 0.032728
GO:0030837 negative regulation of actin filament polymerization 0.75% (1/133) 6.39 0.011901 0.032728
GO:0030835 negative regulation of actin filament depolymerization 0.75% (1/133) 6.39 0.011901 0.032728
GO:0043242 negative regulation of protein complex disassembly 0.75% (1/133) 6.39 0.011901 0.032728
GO:0030834 regulation of actin filament depolymerization 0.75% (1/133) 6.39 0.011901 0.032728
GO:0051016 barbed-end actin filament capping 0.75% (1/133) 6.39 0.011901 0.032728
GO:1902903 regulation of supramolecular fiber organization 0.75% (1/133) 6.39 0.011901 0.032728
GO:1902904 negative regulation of supramolecular fiber organization 0.75% (1/133) 6.39 0.011901 0.032728
GO:1901880 negative regulation of protein depolymerization 0.75% (1/133) 6.39 0.011901 0.032728
GO:1901879 regulation of protein depolymerization 0.75% (1/133) 6.39 0.011901 0.032728
GO:0030688 preribosome, small subunit precursor 0.75% (1/133) 6.39 0.011901 0.032728
GO:0032271 regulation of protein polymerization 0.75% (1/133) 6.39 0.011901 0.032728
GO:0110053 regulation of actin filament organization 0.75% (1/133) 6.39 0.011901 0.032728
GO:0090066 regulation of anatomical structure size 0.75% (1/133) 6.39 0.011901 0.032728
GO:0051693 actin filament capping 0.75% (1/133) 6.39 0.011901 0.032728
GO:0051494 negative regulation of cytoskeleton organization 0.75% (1/133) 6.39 0.011901 0.032728
GO:0001522 pseudouridine synthesis 0.75% (1/133) 6.39 0.011901 0.032728
GO:0051493 regulation of cytoskeleton organization 0.75% (1/133) 6.39 0.011901 0.032728
GO:0044424 intracellular part 4.51% (6/133) 1.82 0.007242 0.0352
GO:0009451 RNA modification 1.5% (2/133) 3.93 0.007552 0.035873
GO:0006281 DNA repair 1.5% (2/133) 3.48 0.013787 0.037421
GO:0003674 molecular_function 33.83% (45/133) 0.51 0.005731 0.037429
GO:0043227 membrane-bounded organelle 2.26% (3/133) 2.82 0.008839 0.039306
GO:0043231 intracellular membrane-bounded organelle 2.26% (3/133) 2.82 0.008839 0.039306
GO:0140098 catalytic activity, acting on RNA 2.26% (3/133) 2.84 0.008502 0.039488
GO:0033043 regulation of organelle organization 0.75% (1/133) 5.8 0.017799 0.041332
GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 0.75% (1/133) 5.8 0.017799 0.041332
GO:0003968 RNA-directed 5'-3' RNA polymerase activity 0.75% (1/133) 5.8 0.017799 0.041332
GO:0030145 manganese ion binding 0.75% (1/133) 5.8 0.017799 0.041332
GO:0010639 negative regulation of organelle organization 0.75% (1/133) 5.8 0.017799 0.041332
GO:0051129 negative regulation of cellular component organization 0.75% (1/133) 5.8 0.017799 0.041332
GO:0016776 phosphotransferase activity, phosphate group as acceptor 0.75% (1/133) 5.8 0.017799 0.041332
GO:0004017 adenylate kinase activity 0.75% (1/133) 5.8 0.017799 0.041332
GO:0019205 nucleobase-containing compound kinase activity 0.75% (1/133) 5.8 0.017799 0.041332
GO:0050145 nucleoside monophosphate kinase activity 0.75% (1/133) 5.8 0.017799 0.041332
GO:0009987 cellular process 12.03% (16/133) 0.93 0.009932 0.043244
GO:0044464 cell part 5.26% (7/133) 1.55 0.01042 0.044446
GO:0006974 cellular response to DNA damage stimulus 1.5% (2/133) 3.3 0.017507 0.045736
GO:0051716 cellular response to stimulus 1.5% (2/133) 3.3 0.017507 0.045736
GO:0033554 cellular response to stress 1.5% (2/133) 3.3 0.017507 0.045736
GO:0006259 DNA metabolic process 1.5% (2/133) 3.18 0.020543 0.047182
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_22 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_38 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_39 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_40 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_49 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_80 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_127 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_139 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_152 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_160 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_166 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.049 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_252 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_257 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_262 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_60 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_74 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_128 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_144 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_235 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_247 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_249 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_40 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_46 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_55 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_131 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_144 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_22 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.03 Archaeplastida Compare
Gingko biloba HCCA Cluster_175 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_184 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_188 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.051 Archaeplastida Compare
Zea mays HCCA Cluster_115 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_175 0.043 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_3 0.029 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_16 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_24 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.039 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_116 0.041 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_160 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_154 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.042 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_176 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_235 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_244 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_290 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_379 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_403 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_434 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_496 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.058 Archaeplastida Compare
Oryza sativa HCCA Cluster_96 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_141 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_173 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_174 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_200 0.034 Archaeplastida Compare
Oryza sativa HCCA Cluster_269 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_286 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_347 0.028 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_11 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_75 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_105 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_193 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_8 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_77 0.046 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_139 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_209 0.049 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_44 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_46 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_53 0.04 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_83 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_121 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.04 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.042 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_22 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.056 Archaeplastida Compare
Sequences (133) (download table)

InterPro Domains

GO Terms

Family Terms