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  5. Smo405193

Smo405193


Description : RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.middle module.MED9 component


Gene families : OG0009423 (Archaeplastida) Phylogenetic Tree(s): OG0009423_tree ,
OG_05_0009450 (LandPlants) Phylogenetic Tree(s): OG_05_0009450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo405193
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016863001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!