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Heatmap: Cluster_112 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.47 0.28 -1.41 -0.77 -0.09 0.52 0.92 0.18 0.08 0.63 -0.51 -0.55 -1.34 -1.69 0.16 -1.56 -0.12 -0.7 -0.19 0.19 - - 0.02 -0.62 0.25 -0.73 1.7 1.11 0.9 0.5 0.07 -0.33
-1.07 -0.75 -0.68 0.59 1.1 1.06 -0.09 -0.39 -0.11 -0.94 -0.67 -1.15 -1.16 -1.56 -1.41 1.44 1.14 -0.34 0.47 0.63 -2.03 -3.48 0.48 0.04 -0.82 0.87 -0.35 0.43 0.09 0.2 -0.27 -2.08
0.43 0.16 0.0 0.25 0.31 0.3 0.29 0.3 0.23 0.45 0.35 0.4 -0.28 -0.28 0.17 -0.05 -0.3 -1.04 0.34 -0.74 - -1.9 -0.18 -0.15 -0.88 0.35 0.48 0.34 -0.13 -0.13 -0.18 0.18
-0.29 -0.11 -0.07 0.19 0.24 0.19 0.43 0.27 0.45 0.27 0.03 -0.09 0.13 -0.3 0.95 0.13 -0.14 -0.27 0.25 -0.71 -6.94 -2.15 0.1 0.03 -3.92 0.33 0.43 0.35 0.14 0.06 -0.07 -0.12
-0.56 -1.91 -1.28 -1.28 0.02 0.02 0.56 0.5 0.63 0.21 0.62 -0.11 -1.75 -2.87 0.08 -1.98 0.15 -0.86 0.14 0.86 0.75 -1.24 -0.07 -0.52 0.28 0.2 0.31 -0.99 0.7 0.94 0.26 0.28
0.26 0.21 0.14 0.25 0.14 0.31 0.19 0.2 0.32 0.26 0.26 0.17 0.15 0.56 0.94 0.35 -0.12 -0.31 -0.14 0.32 -1.37 -2.17 -0.04 0.04 -1.72 -0.57 -0.68 -0.39 -0.15 -0.01 -0.47 -0.48
0.23 -0.25 -0.62 -0.25 -0.05 0.32 0.74 0.42 0.54 0.52 -0.04 0.07 -1.4 -2.01 -0.52 -0.83 0.16 -0.01 0.76 0.68 -3.33 -5.69 -0.01 -0.26 -3.63 -1.53 -0.85 -0.93 0.9 0.89 1.14 0.77
-0.15 0.19 0.29 0.2 0.3 0.29 0.77 0.48 0.31 0.44 -0.25 -0.72 -0.06 -0.62 1.16 -0.18 -1.12 -2.58 0.43 0.73 -1.37 -0.63 -0.93 -0.83 -0.84 0.27 0.21 0.16 -0.65 -0.61 0.13 0.11
0.71 -0.17 -1.09 -0.72 -0.46 0.26 0.36 0.66 0.45 0.54 0.25 0.6 -2.15 -2.48 -0.74 -1.52 -0.38 -0.1 -0.51 0.36 -1.34 0.14 -0.79 -1.1 -2.29 -0.45 0.52 0.8 0.51 0.57 1.05 0.5
0.42 -0.31 -0.4 -0.01 -0.2 -0.14 -0.87 -0.71 -0.77 0.16 -0.81 0.15 -2.08 -0.82 -2.63 -0.13 -0.42 0.32 1.66 1.12 - - 0.06 0.51 -0.21 0.43 0.08 0.19 -0.32 0.18 0.72 1.06
0.29 0.3 0.23 0.26 0.22 0.26 0.06 0.15 0.31 0.27 0.18 0.26 -0.02 0.25 0.29 0.56 -0.4 -0.95 0.32 -0.39 -0.9 -0.35 -0.23 -0.06 -0.96 -0.22 -0.1 0.01 -0.18 -0.03 -0.5 -0.46
0.17 -0.02 0.09 0.22 0.19 0.19 0.18 0.42 0.39 0.38 0.26 0.28 0.5 -0.45 0.25 0.41 -0.45 -1.36 0.36 -0.13 -2.77 -2.51 -0.17 -0.07 -1.41 0.7 0.23 0.34 -0.31 -0.26 -0.28 -0.28
-0.95 -0.47 -1.13 -0.28 -1.07 0.07 0.13 -0.01 0.0 -0.38 -0.82 -0.94 -4.33 -4.47 -2.65 -1.77 0.53 -0.66 1.37 0.97 -3.14 -0.22 -0.82 -1.56 -0.19 0.66 1.49 2.01 0.92 1.06 -1.16 -2.08
-0.13 0.3 0.46 0.4 0.66 0.42 0.35 0.25 0.58 0.2 0.19 -0.09 -0.14 0.27 0.6 0.22 -0.29 -0.99 -0.72 0.33 -2.29 -1.12 0.67 0.61 -0.88 -0.61 -0.56 -0.12 -0.65 -0.25 -1.03 -0.94
-0.04 0.61 0.85 0.91 0.69 0.61 0.54 0.53 0.15 0.32 0.44 0.02 -1.06 -2.47 -1.41 -2.57 0.25 -0.54 0.15 -0.4 -2.0 -1.12 0.33 0.13 -2.35 0.12 0.37 0.54 0.01 0.0 -0.84 -1.19
-0.2 -0.35 0.03 -0.34 0.13 -0.19 -0.14 -0.34 -0.08 0.25 0.29 -0.1 1.4 -1.4 -0.03 0.83 -0.58 1.04 -1.01 0.14 -3.94 -1.54 1.57 1.09 -3.99 -0.06 -1.25 -1.54 -0.4 -0.34 -0.29 -0.28
-0.14 -0.13 -0.55 -0.22 0.03 -0.03 -0.19 -0.16 0.15 0.14 -0.3 -0.05 0.95 -0.0 -2.04 0.52 0.04 0.46 0.27 0.39 -3.98 -6.81 0.52 0.49 -1.88 0.5 0.13 0.29 0.46 0.27 -0.28 0.04
-0.09 -0.29 -0.04 -0.02 -0.29 -0.27 -0.44 -0.26 0.31 -0.3 -0.33 -0.16 0.31 0.21 -0.26 0.81 0.13 0.56 0.45 0.21 -1.85 -0.66 0.95 1.06 -1.65 -0.72 -1.5 -1.37 0.27 0.22 0.16 0.23
0.17 0.05 0.0 -0.0 -0.1 -0.06 -0.0 -0.19 -0.22 0.06 -0.02 -0.1 1.05 -2.09 -0.73 0.11 -0.25 -0.96 0.07 0.92 -1.18 -1.69 0.35 0.3 -0.36 0.8 0.45 0.65 -0.11 -0.13 -0.39 -0.62
-0.03 -0.27 -0.03 0.22 0.48 0.03 0.21 0.44 -0.21 -0.08 -0.36 -0.37 -0.42 -0.66 -0.42 0.44 -0.45 -1.42 1.13 0.4 -3.93 -5.06 0.55 0.52 -0.38 0.16 0.34 0.26 0.29 0.3 0.01 -0.2
-0.73 -0.76 -1.49 -1.7 -1.38 -0.52 0.01 0.22 0.26 -0.43 -0.34 -0.24 -1.64 -2.71 -1.08 -1.08 0.23 1.01 -0.05 0.89 0.67 -5.02 0.24 0.05 0.73 -0.14 0.76 0.56 0.53 0.84 0.64 0.59
-0.03 -0.41 -0.71 -0.03 -0.22 -0.05 -0.21 0.26 0.44 0.11 0.07 0.03 0.61 0.32 0.35 0.28 -0.01 0.38 0.17 -0.43 -2.04 -2.62 0.02 0.29 -1.93 -0.68 -0.53 -0.57 0.39 0.3 0.77 0.79
-0.15 -0.08 0.05 0.25 0.59 0.29 -0.02 0.17 0.26 0.07 0.03 -0.2 0.15 -0.19 0.6 0.41 -0.15 -0.93 0.51 0.28 -2.81 -3.72 0.12 0.15 -2.32 0.52 0.29 0.46 0.02 -0.05 -0.6 -0.39
-0.38 -0.18 -0.14 -0.14 0.23 -0.1 0.04 0.04 0.13 0.11 0.4 0.17 0.3 0.11 1.1 0.11 -0.54 -0.15 0.32 -0.79 -1.61 - -0.06 0.38 -1.01 0.78 0.57 0.48 -0.41 -0.18 -0.98 -0.05
-0.08 -0.06 -0.23 0.17 0.15 0.18 0.28 0.44 0.32 0.35 0.24 0.28 0.19 -0.21 0.43 0.39 -0.62 -1.34 0.13 -1.07 -1.43 -0.77 -0.16 0.07 -0.03 0.99 0.2 0.23 -0.23 -0.25 -0.66 -0.7
-1.34 -0.12 -1.18 -0.04 -1.8 -1.43 0.04 0.14 -1.16 -0.72 -1.25 -1.04 -2.57 -1.81 -3.56 -2.91 0.75 1.87 -1.12 2.03 1.49 - -0.36 -2.51 1.15 -2.37 -0.49 -0.21 0.47 0.37 1.22 0.29
0.18 0.96 -0.23 0.26 -0.45 -1.53 -0.48 0.62 0.8 1.27 0.57 -0.02 0.16 0.99 0.8 -0.59 -1.27 -1.17 -0.47 1.4 0.07 -1.98 -1.79 -1.69 -0.22 -0.28 0.77 0.01 -2.25 -2.24 -1.99 -2.2
0.35 0.01 0.11 0.12 0.25 -0.01 -0.18 0.18 0.25 0.43 0.39 0.21 0.14 0.43 -0.37 0.15 -0.3 -0.54 0.25 0.45 -0.99 -0.51 0.02 0.15 -1.57 0.39 -0.2 -0.24 -0.53 -0.28 -0.36 -0.04
0.04 -0.07 0.16 0.08 0.18 0.33 0.39 0.33 0.01 0.15 0.3 -0.1 -0.27 -0.11 0.4 0.11 -0.3 -0.41 0.25 -0.24 -2.4 0.17 0.06 0.08 -1.03 0.34 0.27 0.04 -0.1 -0.08 -0.38 -0.3
-0.33 -0.03 -0.14 0.01 0.3 0.4 0.25 0.28 0.38 -0.34 -0.16 -0.37 0.2 0.3 0.64 0.43 -0.28 -0.36 0.57 0.66 -0.9 - 0.14 0.14 -1.96 -0.18 0.14 0.11 -0.13 -0.14 -0.28 -0.07
0.56 0.31 0.36 0.38 -0.01 0.07 0.09 0.6 0.39 0.73 0.73 0.69 -4.22 -3.98 -0.35 -3.03 0.17 0.17 -1.1 0.15 -1.91 0.39 -1.52 -2.1 -0.43 0.38 -0.04 0.51 0.0 0.11 0.12 0.27
-0.24 0.13 -1.0 -0.22 -0.54 0.25 0.64 0.57 0.69 0.43 0.11 0.15 -1.03 -0.8 0.04 -1.04 0.72 0.16 -0.38 0.61 -3.34 -0.88 0.31 0.13 -1.71 -0.51 0.0 -0.44 0.46 0.31 0.48 0.35
0.36 0.21 0.15 0.18 0.13 0.4 0.52 0.61 0.43 0.35 0.45 0.22 -0.06 -0.59 -0.33 -0.14 -0.53 -1.91 -0.26 -0.93 -2.09 -2.79 -0.42 -0.19 -1.26 0.54 0.89 0.54 -0.61 -0.74 0.84 -0.13
0.1 0.07 0.31 0.31 0.17 0.25 0.18 0.25 0.17 0.41 0.1 -0.01 -0.14 -0.69 -0.58 -0.1 -0.21 -0.53 -0.27 -0.57 -2.2 -3.08 -0.01 0.08 -0.07 0.68 0.96 0.66 -0.45 -0.41 0.03 0.08
0.09 0.12 0.47 0.12 0.52 0.24 0.06 0.13 0.16 0.09 0.33 0.13 0.12 0.35 0.38 0.26 -0.26 -0.82 0.13 0.03 -2.37 -0.95 0.38 0.18 -0.69 0.41 -0.29 -0.25 -0.3 -0.26 -0.63 -0.56
0.37 0.3 0.23 0.53 0.28 0.54 0.13 0.26 -0.01 0.32 0.31 0.3 0.42 -0.09 0.9 0.66 -0.7 -0.68 0.04 0.35 -2.6 -5.04 -0.36 -0.14 -0.48 -0.55 0.02 -0.27 -0.52 -0.67 -0.47 -0.43
-0.79 -1.15 -0.82 -0.9 -1.45 0.03 0.91 0.72 0.27 0.53 -0.58 -0.19 -1.33 -1.76 0.2 -0.76 -0.07 -0.21 0.24 0.39 -1.59 -1.45 -0.45 -0.49 -0.53 -0.02 1.19 1.07 0.36 0.71 0.71 0.34
0.16 0.28 0.44 0.51 0.64 0.48 0.17 -0.17 0.19 0.09 0.32 0.07 0.76 0.28 0.69 0.49 0.01 -0.1 0.65 0.09 -1.49 -1.24 -0.18 0.26 -1.8 -0.86 -1.29 -1.25 -0.63 -0.4 -1.06 -0.98
-0.7 -0.22 -0.57 0.02 0.36 0.25 0.08 0.38 0.44 0.15 0.2 -0.48 0.16 -0.82 1.37 0.24 -0.51 -0.4 0.57 -0.87 -6.12 -2.97 -0.09 0.14 -1.07 0.57 0.68 0.75 -0.34 0.11 -0.62 -0.32
-0.16 -0.32 -0.03 0.18 0.27 0.36 0.04 0.24 0.06 0.15 -0.1 -0.3 -0.25 -0.14 -1.02 0.16 0.22 -0.02 0.6 -0.24 -3.78 -6.15 0.4 -0.04 -0.56 0.12 0.69 0.74 0.38 0.39 -0.31 -0.17
-0.04 0.17 0.24 0.25 0.41 0.38 0.38 0.43 0.41 0.23 0.11 -0.02 -0.62 -0.08 -0.32 -0.12 0.2 -0.33 0.23 0.08 -1.27 -2.49 0.2 -0.04 -0.81 -0.26 0.5 0.55 0.05 0.08 -0.79 -0.9
-0.23 0.04 -0.25 -0.14 0.49 0.12 0.6 0.15 0.24 -0.06 0.49 -0.19 -3.15 -2.1 -3.6 -0.8 -0.85 -0.65 1.29 0.27 - -4.35 1.13 1.16 1.28 -0.35 0.26 0.34 0.08 -0.41 -0.91 -1.07
-0.12 0.22 0.1 0.51 0.71 0.75 0.42 0.23 0.41 0.31 0.29 -0.03 -0.23 0.23 0.87 0.75 -0.22 -0.83 0.0 -0.43 -3.68 -4.73 0.57 0.1 -2.98 -0.28 -0.57 -0.34 -0.43 -0.29 -0.47 -0.46
-0.28 0.04 -0.6 0.04 0.5 0.49 0.11 0.38 0.55 0.33 0.06 -0.02 -0.03 0.22 0.29 0.25 0.1 -0.35 -0.25 0.14 -0.34 -1.01 0.39 0.15 -0.09 -0.97 -0.11 0.02 -0.15 -0.02 -0.71 -0.83
-0.89 -1.66 0.67 0.2 -0.63 -0.09 -0.48 -0.72 -1.85 -1.53 -1.72 -1.2 0.13 -1.24 -4.37 -0.01 0.93 -1.12 0.77 1.71 - - 1.15 0.08 -0.31 0.77 0.64 -0.15 0.68 -0.15 1.3 0.03
-0.08 -0.59 -0.17 -0.62 -0.82 -0.68 -0.51 -0.06 -0.01 -0.18 0.35 0.7 -0.58 -1.24 -0.95 -0.69 -0.38 0.15 -0.21 0.18 0.15 -1.42 -0.42 -0.49 0.97 0.64 0.98 0.85 0.24 0.31 0.31 0.29
0.19 0.36 0.13 0.32 0.13 0.23 0.21 0.17 0.18 0.22 0.1 0.09 0.22 -0.17 0.42 0.35 -0.28 -0.9 0.36 -0.08 -1.79 -1.62 -0.07 0.09 -1.02 0.06 0.28 0.2 -0.23 -0.18 -0.13 -0.29
0.68 0.77 0.36 0.57 0.28 -0.04 0.5 -0.21 0.49 0.64 0.35 0.46 -4.04 -4.3 -1.43 -3.89 0.48 -0.3 0.33 0.79 -1.51 -4.01 -1.17 -1.91 0.14 -0.16 -0.87 -0.69 0.37 0.32 0.71 0.72
0.21 0.28 0.06 0.31 0.5 0.61 0.19 0.1 0.2 0.32 0.02 0.03 0.32 -0.06 0.33 0.45 -0.01 -0.71 0.26 -0.79 -2.1 -1.41 0.17 0.1 -0.64 -0.5 -0.21 -0.03 -0.07 -0.08 -0.25 -0.27
-0.01 -0.13 -0.27 -0.31 -0.23 -0.07 -0.18 -0.19 -0.03 0.05 0.04 -0.11 0.88 0.44 0.35 0.63 -0.37 0.54 0.17 0.2 -2.13 -1.5 0.54 0.58 -1.19 0.24 -0.41 -0.61 -0.21 -0.24 -0.07 0.23

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.