1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo407049

Smo407049


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.UFO component


Gene families : OG0001709 (Archaeplastida) Phylogenetic Tree(s): OG0001709_tree ,
OG_05_0001097 (LandPlants) Phylogenetic Tree(s): OG_05_0001097_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo407049
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00208090 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00081p00123450 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
GSVIVT01012147001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
MA_10427781g0010 No alias F-box only protein 6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10431723g0010 No alias F-box only protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c14_15770V3.1 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 Archaeplastida
Pp3c25_9600V3.1 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0010242 oxygen evolving activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 63 107
No external refs found!