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  5. AMTR_s00016p00178190

AMTR_s00016p00178190 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.140

Description : CASP-like protein 1F1 OS=Vitis vinifera


Gene families : OG0000389 (Archaeplastida) Phylogenetic Tree(s): OG0000389_tree ,
OG_05_0000192 (LandPlants) Phylogenetic Tree(s): OG_05_0000192_tree ,
OG_06_0000438 (SeedPlants) Phylogenetic Tree(s): OG_06_0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00178190
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00265970 evm_27.TU.AmTr_v1... Casparian strip membrane protein 3 OS=Sorghum bicolor 0.05 Archaeplastida
AMTR_s00040p00135930 evm_27.TU.AmTr_v1... Casparian strip membrane protein 2 OS=Vitis vinifera 0.04 Archaeplastida
AMTR_s00092p00142720 evm_27.TU.AmTr_v1... CASP-like protein 1B2 OS=Populus trichocarpa 0.03 Archaeplastida
AT1G03700 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
AT1G14160 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
AT2G27370 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
AT2G36100 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
AT3G06390 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
AT3G11550 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
AT4G03540 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
AT4G15610 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
AT4G15620 No alias Uncharacterised protein family (UPF0497) 0.06 Archaeplastida
AT4G20390 No alias Uncharacterised protein family (UPF0497) 0.05 Archaeplastida
AT5G06200 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
AT5G15290 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
AT5G44550 No alias Uncharacterised protein family (UPF0497) 0.05 Archaeplastida
GSVIVT01008618001 No alias CASP-like protein 1F1 OS=Vitis vinifera 0.04 Archaeplastida
GSVIVT01010992001 No alias CASP-like protein 1E1 OS=Vitis vinifera 0.04 Archaeplastida
GSVIVT01017795001 No alias CASP-like protein 1E2 OS=Vitis vinifera 0.02 Archaeplastida
GSVIVT01020544001 No alias CASP-like protein 1C2 OS=Vitis vinifera 0.04 Archaeplastida
GSVIVT01036085001 No alias Casparian strip membrane protein 2 OS=Vitis vinifera 0.04 Archaeplastida
GSVIVT01037957001 No alias CASP-like protein 1B2 OS=Vitis vinifera 0.05 Archaeplastida
Gb_11696 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 Archaeplastida
Gb_11697 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 Archaeplastida
Gb_12159 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 Archaeplastida
Gb_26811 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_26813 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 Archaeplastida
Gb_26814 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.02 Archaeplastida
Gb_40899 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 Archaeplastida
LOC_Os02g36845.1 No alias Casparian strip membrane protein 7 OS=Oryza sativa... 0.04 Archaeplastida
LOC_Os02g51010.1 No alias Casparian strip membrane protein 4 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os04g38690.1 No alias Casparian strip membrane protein 1 OS=Oryza rufipogon... 0.03 Archaeplastida
LOC_Os04g58760.1 No alias Casparian strip membrane protein 1 OS=Oryza sativa... 0.04 Archaeplastida
LOC_Os06g12500.1 No alias Casparian strip membrane protein 3 OS=Oryza sativa... 0.04 Archaeplastida
MA_10429324g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.02 Archaeplastida
MA_10431939g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.02 Archaeplastida
MA_5227376g0010 No alias Casparian strip membrane protein 1 OS=Picea glauca... 0.03 Archaeplastida
MA_5618864g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 Archaeplastida
MA_67384g0020 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 Archaeplastida
MA_90653g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_94788g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 Archaeplastida
Pp3c10_17030V3.1 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
Pp3c12_23940V3.1 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
Pp3c14_2270V3.1 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
Pp3c22_13920V3.1 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
Solyc01g067300.3.1 No alias CASP-like protein 1D1 OS=Populus trichocarpa... 0.03 Archaeplastida
Solyc02g069730.3.1 No alias CASP-like protein 1B1 OS=Ricinus communis... 0.04 Archaeplastida
Solyc02g088160.4.1 No alias Casparian strip membrane protein 3 OS=Oryza sativa... 0.04 Archaeplastida
Solyc03g097720.4.1 No alias CASP-like protein 1F1 OS=Vitis vinifera... 0.06 Archaeplastida
Solyc03g097730.2.1 No alias CASP-like protein 1F1 OS=Ricinus communis... 0.02 Archaeplastida
Solyc04g005620.3.1 No alias Casparian strip membrane protein 2 OS=Solanum demissum... 0.04 Archaeplastida
Solyc06g072550.3.1 No alias CASP-like protein 1F1 OS=Vitis vinifera... 0.01 Archaeplastida
Solyc06g074230.3.1 No alias Casparian strip membrane protein 2 OS=Triphysaria... 0.03 Archaeplastida
Solyc09g010200.4.1 No alias Casparian strip membrane protein 1 OS=Nicotiana tabacum... 0.03 Archaeplastida
Solyc10g083250.2.1 No alias Casparian strip membrane protein 1 OS=Nicotiana tabacum... 0.04 Archaeplastida
Zm00001e006491_P001 No alias Casparian strip membrane protein 2 OS=Zea mays... 0.05 Archaeplastida
Zm00001e015806_P001 No alias Casparian strip membrane protein 3 OS=Sorghum bicolor... 0.04 Archaeplastida
Zm00001e017631_P001 No alias CASP-like protein 1E1 OS=Zea mays (sp|b4fap1|cspl4_maize : 254.0) 0.03 Archaeplastida
Zm00001e024279_P001 No alias Casparian strip membrane protein 2 OS=Sorghum bicolor... 0.04 Archaeplastida
Zm00001e026902_P001 No alias CASP-like protein 1C2 OS=Zea mays (sp|b6szu6|cspl5_maize : 227.0) 0.03 Archaeplastida
Zm00001e036094_P001 No alias Casparian strip membrane protein 1 OS=Zea mays... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003883 CTP synthase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004594 pantothenate kinase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Neighborhood
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009165 nucleotide biosynthetic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
BP GO:0015937 coenzyme A biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006702 CASP_dom 21 163
No external refs found!