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Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor
Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo409950 | |
| Cluster | HCCA: Cluster_68 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os05g04740.2 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| LOC_Os09g28210.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Mp3g17930.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Pp3c3_28970V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| Solyc01g102300.3.1 | No alias | transcription factor (bHLH). PIF red/far-red light... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004650 | polygalacturonase activity | IEP | Neighborhood |
| MF | GO:0005509 | calcium ion binding | IEP | Neighborhood |
| CC | GO:0005811 | lipid droplet | IEP | Neighborhood |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0008104 | protein localization | IEP | Neighborhood |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Neighborhood |
| CC | GO:0012511 | monolayer-surrounded lipid storage body | IEP | Neighborhood |
| BP | GO:0015031 | protein transport | IEP | Neighborhood |
| BP | GO:0015833 | peptide transport | IEP | Neighborhood |
| MF | GO:0016209 | antioxidant activity | IEP | Neighborhood |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Neighborhood |
| BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0042886 | amide transport | IEP | Neighborhood |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
| MF | GO:0051920 | peroxiredoxin activity | IEP | Neighborhood |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
| BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 216 | 256 |
| No external refs found! |