Heatmap: Cluster_68 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.08 -0.17 -0.14 -0.17 -0.08 -0.01 -0.04 0.13 0.04 0.11 0.05 -0.17 0.16 0.25 0.3 0.43 -0.51 -0.88 0.28 0.9 -0.74 -1.01 -0.19 -0.13 0.65 0.31 0.1 -0.02 -0.28 -0.22 -0.18 -0.31
-0.07 0.09 0.0 0.12 0.11 0.43 0.12 -0.03 0.03 -0.03 0.04 -0.43 -0.01 -0.7 0.4 0.14 -0.27 -0.07 0.01 1.09 0.51 0.17 0.09 0.02 -1.09 -1.01 -0.21 -0.05 0.06 0.2 -0.98 -0.81
-1.88 -1.81 -0.62 -1.06 -0.86 -0.1 -0.93 -1.67 -1.84 -0.19 -1.89 -2.13 -2.26 -1.61 1.66 -1.14 -1.06 -0.7 3.87 2.15 - - -2.06 -3.79 - -3.68 -1.92 -2.56 -1.14 -1.55 -2.18 -2.26
-0.03 0.51 0.36 0.47 -0.16 0.55 0.02 -0.44 -0.18 -0.01 -0.05 -0.22 -7.39 -2.07 -2.84 -4.06 0.42 -0.15 1.65 2.81 0.88 -0.24 -2.75 -3.89 -1.27 -2.62 -0.99 -1.13 -1.22 -0.36 -1.55 -1.78
-1.84 -1.62 -1.51 -1.29 -0.95 -0.57 -0.54 -1.83 -3.14 -1.3 -0.33 -2.07 -1.72 -1.75 2.26 -0.71 -0.86 -2.36 -0.78 3.85 - 0.12 -1.64 -3.85 0.21 - -0.86 -0.68 -1.44 -1.16 -1.73 -2.16
-5.77 -5.09 -6.97 -6.38 -3.18 -4.22 -3.35 -4.5 -6.5 -5.73 -5.86 -6.11 -7.18 -4.14 -9.26 -3.56 -6.05 -2.73 3.63 3.49 2.53 0.38 -8.72 -3.33 -5.75 -2.86 -2.79 -5.33 -4.56 -4.42 -4.64 -5.07
- - - - - - - - - - - - 0.54 - - 0.65 0.3 0.85 0.36 3.17 0.39 2.67 0.02 0.2 -1.76 - - - 0.19 0.24 0.61 0.74
-0.12 -0.56 -0.39 -0.17 -1.13 -0.44 -0.81 -0.54 -0.55 -0.25 -0.92 -0.46 0.77 -0.5 -3.22 1.74 -0.94 -2.4 0.69 1.95 0.43 - -0.7 -1.83 0.84 1.46 0.06 0.68 -0.37 -0.66 -1.37 -1.96
-4.07 -3.51 -4.34 -3.63 -2.67 -2.81 -2.22 -2.98 -2.91 -2.6 -3.37 -3.3 -2.89 -2.79 -0.0 -2.26 -2.66 -2.83 4.14 2.74 0.95 0.75 -5.67 -4.2 -3.8 -5.12 -3.42 -3.24 -3.94 -3.04 -3.51 -2.4
-1.08 -1.04 -1.6 -1.99 -1.73 -2.14 -2.17 -2.87 -2.63 -2.71 -1.71 -2.19 -1.91 -0.13 -0.04 -0.35 0.26 0.57 2.24 1.72 1.45 -1.73 0.11 0.25 -0.57 0.57 -0.91 -0.61 0.34 0.52 0.26 1.35
-0.94 -0.83 -0.71 -0.76 -0.91 -0.81 -0.5 -0.56 -0.6 -0.37 -0.26 -0.38 0.14 -1.16 0.26 0.23 -0.03 0.43 1.01 1.98 -0.27 1.38 0.04 0.13 -3.15 -0.06 -2.31 -2.86 0.25 0.19 0.39 0.45
-0.19 -0.64 -0.8 -0.5 -0.87 -0.84 -0.76 -0.93 -0.47 -0.31 0.0 -0.04 -0.87 -0.5 0.02 -0.67 -1.5 -2.99 2.88 1.81 0.11 0.95 -1.25 -0.66 0.49 -0.31 -1.06 -1.17 -1.16 -0.89 -0.79 -1.03
-3.22 -2.31 -2.9 -1.92 -4.22 -1.26 -1.24 -1.87 -1.27 -1.5 -1.17 -1.74 -0.88 2.03 1.75 -1.05 -1.83 -1.51 -1.48 3.26 0.28 1.33 -2.14 -1.15 0.77 -1.21 0.0 0.21 -1.73 -1.64 -3.2 -3.18
-0.87 -1.06 -0.57 -0.84 -0.92 -0.77 -0.62 -1.16 -0.35 -0.65 -0.16 -0.89 -4.5 -2.35 -0.61 -3.05 -1.89 -2.26 0.06 3.84 2.09 1.07 -5.8 -6.84 -1.58 -2.73 -2.45 -1.91 -2.6 -2.68 -3.26 -3.57
-2.92 -2.13 -2.09 -0.75 -1.32 -0.24 -1.44 -1.93 -1.99 -3.51 -2.52 -1.37 -1.29 -1.69 2.62 -1.02 -0.7 -1.96 1.19 3.47 - -1.69 -4.73 -2.55 - -1.43 1.54 0.69 -2.57 -2.36 -1.43 -1.89
-1.39 -1.03 -0.43 -0.35 0.05 -0.75 -0.93 -0.64 -0.19 -0.94 -0.94 -0.8 0.84 -1.5 0.75 0.92 -0.85 -2.12 -0.27 3.05 -1.54 1.31 -1.89 -1.65 -0.57 0.87 -0.49 -0.55 -1.61 -1.07 -1.91 -1.63
-1.35 - - - - - - - -2.84 -1.26 - -1.57 -2.25 - - -2.23 -1.32 - 4.3 3.32 - - - - - - - - - - - -2.5
0.77 -0.44 -1.55 -0.14 -1.63 -2.23 -0.12 -2.54 -1.29 -1.22 -0.06 0.16 1.59 -2.28 -0.84 0.18 -1.33 -2.06 1.15 2.65 -0.6 - -3.07 -3.03 0.14 1.71 0.5 1.37 -3.92 -1.81 -3.84 -4.12
-0.89 0.09 0.13 0.33 -0.91 - -0.05 -0.12 -1.24 0.28 -1.75 -1.59 -1.94 -0.57 2.55 -1.19 -1.46 - 0.72 2.06 - 1.28 -0.74 -2.15 -1.03 -0.05 0.28 1.05 -0.8 -1.49 -1.11 -0.85
-1.01 -0.48 -1.8 -1.52 -0.65 -0.6 -0.63 -2.05 -0.83 0.0 -0.53 -0.93 -1.22 -0.73 3.05 -0.74 -0.91 -0.92 0.95 3.02 -1.69 - -2.88 -2.16 -0.02 -0.74 -0.93 - -1.3 -1.37 -1.58 -1.84
-0.72 -1.17 -1.15 -0.77 -0.88 -0.49 -0.68 -0.86 -0.29 -0.46 -0.25 -0.79 -0.75 -0.75 0.22 0.56 -0.67 -0.64 2.82 1.1 0.11 0.0 -2.48 -1.66 0.3 -0.56 -0.62 -0.83 -0.16 0.11 0.17 0.5
-0.93 -1.77 -2.49 -1.25 -1.55 -2.73 -1.57 -0.96 -1.77 -1.76 -1.45 -1.13 -1.43 -2.37 -3.03 -1.13 -0.2 -0.11 0.01 3.33 -1.77 2.28 0.42 -0.05 -0.59 -0.68 0.2 0.13 0.08 -0.2 -1.02 -1.34
-0.65 -0.49 -0.91 -0.46 -1.4 0.11 -0.58 -0.39 -0.09 -0.12 -0.66 -0.65 -1.73 -0.58 2.01 -1.46 -1.27 -1.55 1.05 2.18 1.88 -2.15 -2.04 -0.57 0.57 -0.92 0.1 0.11 -1.31 -1.38 -1.41 -0.99
-1.38 -1.54 -2.95 -2.66 -1.1 -0.39 -1.0 -0.98 -3.93 -2.23 -0.21 -2.14 -0.15 -0.55 2.19 -2.35 -2.98 -3.41 -2.42 3.11 1.99 2.43 -3.97 -3.05 -1.48 -1.67 -2.39 - -1.59 -0.47 -1.6 -2.23
-0.36 -0.71 -0.5 -1.6 0.66 -0.29 -0.85 -0.58 0.42 0.21 -0.37 0.15 -3.32 -5.32 -0.41 -1.95 -1.4 -0.18 1.6 3.4 -0.01 0.93 -2.46 -1.65 -3.46 -1.14 -2.58 -2.28 -2.39 -1.75 -1.8 -1.04
-2.44 -1.23 -0.68 -1.1 -0.88 -0.96 -0.79 -0.46 -1.24 -1.52 -1.62 -1.9 -1.15 -0.72 2.55 -0.63 -2.2 -0.34 0.66 2.81 - - -1.96 -2.71 -1.5 -0.74 1.88 1.74 -2.92 -1.75 -2.03 -1.51
- - - - - - - - - - - - 0.6 - -0.27 - - - 4.55 2.62 - - - - - - - - - - - -
-3.18 -2.42 -3.17 -3.19 -3.66 -2.22 -1.43 -2.86 -3.34 -4.09 -6.26 -2.66 -2.81 -1.09 -0.5 -3.24 -2.29 -6.98 1.01 3.95 2.21 2.64 -6.97 -6.11 -2.63 -6.09 -5.88 - -3.57 -3.64 -4.54 -5.61
-2.99 -0.51 1.09 -1.32 0.98 -1.32 - 0.25 - - - - 0.9 -1.25 -1.62 0.79 -0.68 - 3.33 1.76 - - -0.78 -0.79 0.51 - - - -0.4 -0.34 0.99 -0.83
-0.73 -1.35 -0.6 -0.27 -1.12 -1.12 -0.31 -1.11 -0.06 -0.25 -0.58 -0.18 -4.54 -4.83 -1.1 -2.16 -1.46 0.26 3.52 1.46 -2.4 -1.6 -0.71 0.43 0.99 -0.66 -1.93 -2.51 -1.69 -1.11 -0.82 -0.79
-2.22 -0.75 -0.16 0.06 -0.57 -0.57 -0.57 -0.34 -0.63 -0.47 -2.15 -0.75 -26.84 -3.77 -0.25 -5.9 1.19 - 2.53 0.99 -0.77 -0.85 0.73 0.59 - 0.55 0.81 0.8 0.55 0.52 -0.91 -0.83
-3.02 -2.87 -4.36 -1.46 -0.73 -0.29 -2.92 -0.9 -1.09 -1.76 -3.06 -1.99 -4.4 -2.82 -0.65 -3.33 -0.53 -2.89 3.25 1.76 -0.83 -2.79 0.36 -0.23 -0.68 1.24 1.65 1.4 -1.32 -0.49 -0.83 -2.52
-1.3 -2.07 -1.89 -0.71 0.03 -0.75 -2.01 -1.56 -0.24 -1.53 -2.4 -0.81 -2.4 -2.03 2.26 0.29 -0.67 -1.54 -0.22 3.56 1.65 0.11 -2.01 -3.61 - -1.37 -0.48 - - -1.51 -2.54 -3.61
-1.1 -0.35 -0.39 -0.43 0.01 -0.95 -0.8 -4.88 -0.37 -0.53 -1.33 -0.54 -0.27 -1.03 1.59 -0.94 -0.33 -0.3 -0.26 2.42 - 1.27 -1.21 -1.49 1.34 -3.46 0.38 0.57 -0.72 -0.08 -0.72 0.18
- - - - - - - - - - - - - - - - - - 3.74 4.22 - - - - - - - - - - - -
-3.92 -5.48 -2.52 -3.15 -1.93 -3.33 -2.86 -2.54 -3.96 -3.29 -1.57 -2.8 0.08 -1.16 -0.8 -1.09 -5.54 -2.72 3.11 3.16 2.89 0.12 -3.86 -1.75 - -2.64 -2.85 -1.45 -3.88 -1.89 -4.48 -2.96
-0.8 -1.36 -1.56 -1.28 -0.19 0.1 -0.42 -0.22 -0.29 -0.24 -0.59 -0.97 -0.42 -1.19 0.68 0.66 -0.77 -0.64 2.77 1.63 -0.05 0.16 -1.47 -2.17 0.42 0.04 -0.39 -0.04 -1.21 -1.05 -1.35 -1.68
-0.64 -1.65 -0.92 -0.89 -0.32 0.48 0.87 0.5 0.58 0.34 -0.89 -0.82 -1.14 -0.75 0.96 -0.49 -0.5 -0.6 1.06 1.34 -0.01 0.09 -0.51 -0.79 -0.58 -0.36 -0.0 0.55 -0.13 -0.57 0.13 0.06
-3.66 -3.78 -4.45 -3.37 -1.81 -2.23 -3.45 -2.56 -3.94 -1.88 -2.3 -2.99 1.0 -1.08 0.03 -0.29 -2.53 -2.39 4.11 2.57 - -0.86 -1.85 -2.25 -1.99 -1.74 -3.22 -2.4 -3.07 -2.78 -5.63 -2.69
-1.02 -0.59 -0.71 -0.21 -0.02 -0.05 -0.34 -0.02 -0.35 -0.23 0.07 -0.51 -1.11 0.98 2.61 0.08 -2.98 0.98 0.4 2.21 -3.4 -1.68 -3.74 -3.45 -5.26 -1.0 0.09 0.12 -3.01 -2.33 -1.36 -0.71
-0.16 -0.31 -0.29 -0.35 -0.09 -0.08 -0.17 0.13 -0.01 0.09 -0.02 -0.08 0.34 0.15 0.4 0.16 -1.1 -1.72 0.34 1.37 -2.08 -0.84 -0.55 -0.3 0.12 1.08 0.87 0.58 -0.81 -0.82 -0.83 -0.14
-0.78 -0.42 -0.4 0.13 -0.09 0.18 0.24 0.04 0.14 -0.41 -0.5 -0.82 0.46 0.45 0.68 0.51 -0.09 -0.36 0.34 0.94 0.22 0.12 0.18 0.29 -0.26 -0.67 -0.29 -0.18 0.02 0.24 -1.35 -1.45
-0.81 -1.06 -0.32 0.04 0.09 0.93 0.36 -0.58 0.17 -0.85 -0.75 -1.0 -1.27 -1.71 1.61 -1.55 -0.99 -1.58 -0.95 2.39 1.68 - -1.34 -1.59 0.47 -1.46 0.74 1.13 -1.47 -1.0 -2.63 -2.76
-1.86 -0.98 -1.49 -1.15 -0.78 -0.59 -0.95 -1.65 -1.37 -1.72 -1.3 -1.87 -0.54 0.04 0.74 0.38 -1.39 -0.7 2.91 2.19 -1.56 -0.21 -0.25 0.45 -0.89 -3.56 -0.71 -1.39 -0.85 -0.64 0.59 0.56
-0.63 -1.37 -2.76 -1.52 -1.23 -0.59 0.2 -0.17 -1.08 0.72 -1.02 -1.24 -1.28 -0.12 0.78 -1.8 -0.65 -0.6 -3.32 3.64 -2.27 0.46 -1.74 -1.71 -1.25 -3.18 -0.71 0.37 -0.5 -1.58 -0.54 -0.36
-0.73 -0.99 -1.32 -0.92 -0.4 -0.71 -0.39 -0.14 -0.3 -0.22 -0.22 -0.36 -1.18 -0.49 1.32 -0.44 -1.35 -1.19 2.0 2.29 -2.18 -1.86 -1.67 -1.46 -0.43 0.54 1.25 1.07 -1.19 -1.22 -1.54 -1.16
-4.32 - - -2.43 -3.77 -2.76 - -2.67 - -4.22 -3.98 -2.05 - -1.24 0.93 -1.96 - -0.16 3.73 3.68 -2.49 - - -2.25 - - - - -1.3 -2.25 -1.55 -2.93
-0.78 -1.01 -1.22 -0.57 -0.82 -0.42 -0.36 -1.9 -0.93 -1.66 -0.67 -1.41 -0.94 -0.92 1.16 -1.07 -0.22 -0.34 -0.52 3.08 1.26 1.52 -1.21 -1.1 0.59 -1.16 -0.94 -0.27 -0.81 -0.72 -2.28 -2.25
-1.47 -1.15 -0.74 -1.03 -1.08 -0.81 -0.87 -1.37 -1.6 -1.63 -1.4 -1.42 -1.2 -1.75 -0.8 -0.83 -0.83 -0.94 -1.13 3.33 1.4 1.67 -0.89 -0.88 1.43 -1.58 -1.2 -1.63 -1.1 -1.06 -0.33 -0.31
-0.22 -2.36 -2.33 -1.77 0.07 -0.37 0.11 -0.85 -2.38 -0.87 -0.24 -1.46 -1.37 -3.65 1.71 -0.32 0.02 -1.16 3.33 1.34 0.83 -1.94 -3.37 -3.51 0.63 -2.38 -1.63 -2.27 -0.45 -1.03 -1.07 -1.78
-0.73 -1.19 -1.48 -0.99 -1.11 -0.64 -0.74 -0.45 -0.07 -0.54 -0.53 -0.14 0.62 1.25 1.01 1.34 -0.69 0.17 -0.27 2.36 -1.27 -2.44 -2.71 -2.63 -1.17 0.77 1.12 0.44 -1.5 -0.92 -1.72 -1.0
-1.06 -1.34 -1.44 -1.25 -1.54 -1.0 -1.29 -1.49 -1.19 -1.0 -1.35 -1.18 -0.84 -1.4 0.64 -0.91 -1.19 -1.25 -0.83 3.66 1.62 1.31 -1.43 -1.42 -0.37 -2.42 -1.81 -1.77 -1.15 -1.2 -1.01 -0.72
-0.48 -1.52 -2.42 -2.45 -0.22 -3.23 -1.56 -0.54 -1.33 -0.52 -0.6 -0.23 0.57 0.32 1.54 1.16 -2.23 - 3.7 1.51 - - -2.69 -2.44 -1.71 -0.36 -5.1 -2.19 -2.48 -3.5 -4.11 -4.03
-1.68 -1.75 -1.94 -1.52 -2.25 -1.22 -1.4 -1.1 -1.93 -1.35 -1.03 -1.85 1.0 0.3 0.71 0.98 -0.15 0.85 2.24 1.52 1.07 -0.04 -0.06 0.26 -0.47 0.09 -0.98 -1.48 -0.24 -0.39 -0.64 -0.75
-0.81 0.1 -1.22 -0.3 0.41 -0.01 -0.46 -0.17 0.01 -0.02 -0.42 -0.23 -2.43 -4.5 0.85 -1.64 -1.36 -1.88 0.69 2.82 1.39 1.89 -0.96 -1.74 -1.39 -1.42 -1.76 -0.82 -1.15 -1.38 -1.97 -3.8

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.