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Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor
Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo409967 | |
| Cluster | HCCA: Cluster_45 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00045p00141060 | evm_27.TU.AmTr_v1... | External stimuli response.light.red/far red light.PIF... | 0.02 | Archaeplastida | |
| AT1G27740 | RSL4 | root hair defective 6-like 4 | 0.03 | Archaeplastida | |
| AT1G66470 | RHD6 | ROOT HAIR DEFECTIVE6 | 0.03 | Archaeplastida | |
| AT2G14760 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| AT3G50330 | HEC2 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| AT4G33880 | RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 | 0.02 | Archaeplastida | |
| AT5G43175 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| GSVIVT01018164001 | No alias | Transcription factor UNE10 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| LOC_Os01g02110.1 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida | |
| LOC_Os03g10770.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| LOC_Os07g39940.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| LOC_Os11g41640.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| LOC_Os12g32400.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| LOC_Os12g39850.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| LOC_Os12g40590.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| MA_100071g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_29441g0010 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| MA_306658g0010 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| MA_83500g0010 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Mp3g17350.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Mp3g23300.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Mp6g21470.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Pp3c16_21590V3.1 | No alias | ROOT HAIR DEFECTIVE 6-LIKE 2 | 0.02 | Archaeplastida | |
| Solyc01g102300.3.1 | No alias | transcription factor (bHLH). PIF red/far-red light... | 0.03 | Archaeplastida | |
| Solyc01g107140.3.1 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida | |
| Solyc02g091440.2.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| Solyc04g077960.1.1 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida | |
| Solyc12g088380.1.1 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida | |
| Zm00001e015610_P001 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| Zm00001e025656_P001 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| Zm00001e029147_P001 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Zm00001e035422_P001 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e038765_P001 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005783 | endoplasmic reticulum | IEP | Neighborhood |
| BP | GO:0007275 | multicellular organism development | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| BP | GO:0009555 | pollen development | IEP | Neighborhood |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Neighborhood |
| BP | GO:0019725 | cellular homeostasis | IEP | Neighborhood |
| BP | GO:0032501 | multicellular organismal process | IEP | Neighborhood |
| BP | GO:0032502 | developmental process | IEP | Neighborhood |
| BP | GO:0042592 | homeostatic process | IEP | Neighborhood |
| BP | GO:0045454 | cell redox homeostasis | IEP | Neighborhood |
| BP | GO:0048229 | gametophyte development | IEP | Neighborhood |
| BP | GO:0048856 | anatomical structure development | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| BP | GO:0065008 | regulation of biological quality | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 422 | 464 |
| No external refs found! |