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Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.252
Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type
Gene families : OG0001367 (Archaeplastida) Phylogenetic Tree(s): OG0001367_tree ,
OG_05_0020398 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0019583 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00016p00240730 | |
| Cluster | HCCA: Cluster_88 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01001115001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | Archaeplastida | |
| GSVIVT01018088001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
| MA_10435503g0020 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| MA_703456g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Solyc01g068490.4.1 | No alias | E3 ubiquitin ligase (PUB) | 0.02 | Archaeplastida | |
| Solyc01g096200.4.1 | No alias | E3 ubiquitin ligase (PUB) | 0.02 | Archaeplastida | |
| Solyc09g083060.4.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001871 | pattern binding | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Neighborhood |
| MF | GO:0004888 | transmembrane signaling receptor activity | IEP | Neighborhood |
| MF | GO:0004970 | ionotropic glutamate receptor activity | IEP | Neighborhood |
| MF | GO:0005230 | extracellular ligand-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0005231 | excitatory extracellular ligand-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0005234 | extracellularly glutamate-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0008037 | cell recognition | IEP | Neighborhood |
| MF | GO:0008066 | glutamate receptor activity | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| BP | GO:0022414 | reproductive process | IEP | Neighborhood |
| MF | GO:0022824 | transmitter-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Neighborhood |
| MF | GO:0022835 | transmitter-gated channel activity | IEP | Neighborhood |
| MF | GO:0030246 | carbohydrate binding | IEP | Neighborhood |
| MF | GO:0030247 | polysaccharide binding | IEP | Neighborhood |
| CC | GO:0030288 | outer membrane-bounded periplasmic space | IEP | Neighborhood |
| MF | GO:0030594 | neurotransmitter receptor activity | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| MF | GO:0038023 | signaling receptor activity | IEP | Neighborhood |
| CC | GO:0042597 | periplasmic space | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0048544 | recognition of pollen | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006911 | ARM-rpt_dom | 59 | 218 |
| No external refs found! |