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  4. Sequence
  5. Smo412250

Smo412250


Description : Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.MPH2 acclimation factor


Gene families : OG0006774 (Archaeplastida) Phylogenetic Tree(s): OG0006774_tree ,
OG_05_0006039 (LandPlants) Phylogenetic Tree(s): OG_05_0006039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo412250
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00252900 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
AT4G02530 No alias chloroplast thylakoid lumen protein 0.06 Archaeplastida
Cre06.g256250 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
GSVIVT01015564001 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 Archaeplastida
Gb_39226 No alias photosynthetic acclimation MPH2 acclimation factor 0.04 Archaeplastida
Gb_41224 No alias photosynthetic acclimation MPH2 acclimation factor 0.09 Archaeplastida
LOC_Os06g49160.1 No alias photosynthetic acclimation MPH2 acclimation factor 0.07 Archaeplastida
MA_4765g0010 No alias photosynthetic acclimation MPH2 acclimation factor 0.04 Archaeplastida
MA_58974g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp7g01620.1 No alias photosynthetic acclimation MPH2 acclimation factor 0.11 Archaeplastida
Pp3c24_6770V3.1 No alias chloroplast thylakoid lumen protein 0.06 Archaeplastida
Pp3c8_15020V3.1 No alias chloroplast thylakoid lumen protein 0.09 Archaeplastida
Solyc12g009600.2.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e013209_P001 No alias photosynthetic acclimation MPH2 acclimation factor 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046422 violaxanthin de-epoxidase activity IEP Neighborhood
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
MF GO:0098809 nitrite reductase activity IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!