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  5. AMTR_s00016p00245800

AMTR_s00016p00245800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.280

No description available


Gene families : OG0001211 (Archaeplastida) Phylogenetic Tree(s): OG0001211_tree ,
OG_05_0000742 (LandPlants) Phylogenetic Tree(s): OG_05_0000742_tree ,
OG_06_0000399 (SeedPlants) Phylogenetic Tree(s): OG_06_0000399_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00245800
Cluster HCCA: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
AT1G28190 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.08 Archaeplastida
AT5G12340 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.07 Archaeplastida
GSVIVT01037265001 No alias No description available 0.04 Archaeplastida
Gb_11824 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_26414 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g72360.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os03g24100.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os07g46510.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g33050.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10248626g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10381881g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10435613g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_118095g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_168522g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_218732g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_311429g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_469837g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5824616g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_600517g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_74636g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_88642g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc04g057830.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e011175_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e018591_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e031559_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e038180_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025322 DUF4228_plant 18 213
No external refs found!