- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.359
Description : RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2A snRNP component
Gene families : OG0004206 (Archaeplastida) Phylogenetic Tree(s): OG0004206_tree ,
OG_05_0006505 (LandPlants) Phylogenetic Tree(s): OG_05_0006505_tree ,
OG_06_0008414 (SeedPlants) Phylogenetic Tree(s): OG_06_0008414_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00016p00258810 | |
| Cluster | HCCA: Cluster_259 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | Neighborhood |
| CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Neighborhood |
| BP | GO:0000726 | non-recombinational repair | IEP | Neighborhood |
| MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
| MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
| MF | GO:0003678 | DNA helicase activity | IEP | Neighborhood |
| MF | GO:0004003 | ATP-dependent DNA helicase activity | IEP | Neighborhood |
| MF | GO:0004519 | endonuclease activity | IEP | Neighborhood |
| MF | GO:0004521 | endoribonuclease activity | IEP | Neighborhood |
| MF | GO:0004525 | ribonuclease III activity | IEP | Neighborhood |
| MF | GO:0004540 | ribonuclease activity | IEP | Neighborhood |
| MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005509 | calcium ion binding | IEP | Neighborhood |
| MF | GO:0005525 | GTP binding | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
| CC | GO:0005672 | transcription factor TFIIA complex | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006302 | double-strand break repair | IEP | Neighborhood |
| BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | Neighborhood |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0006826 | iron ion transport | IEP | Neighborhood |
| BP | GO:0006888 | ER to Golgi vesicle-mediated transport | IEP | Neighborhood |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Neighborhood |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Neighborhood |
| BP | GO:0009119 | ribonucleoside metabolic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| MF | GO:0015093 | ferrous iron transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0015684 | ferrous iron transport | IEP | Neighborhood |
| BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
| CC | GO:0030117 | membrane coat | IEP | Neighborhood |
| CC | GO:0030120 | vesicle coat | IEP | Neighborhood |
| CC | GO:0030127 | COPII vesicle coat | IEP | Neighborhood |
| CC | GO:0030684 | preribosome | IEP | Neighborhood |
| CC | GO:0030688 | preribosome, small subunit precursor | IEP | Neighborhood |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Neighborhood |
| MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| BP | GO:0042278 | purine nucleoside metabolic process | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044433 | cytoplasmic vesicle part | IEP | Neighborhood |
| CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
| BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Neighborhood |
| BP | GO:0070838 | divalent metal ion transport | IEP | Neighborhood |
| MF | GO:0072509 | divalent inorganic cation transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0072511 | divalent inorganic cation transport | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| BP | GO:1901068 | guanosine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Neighborhood |
| CC | GO:1903293 | phosphatase complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |