1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo415432

Smo415432


Description : Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica


Gene families : OG0001434 (Archaeplastida) Phylogenetic Tree(s): OG0001434_tree ,
OG_05_0001016 (LandPlants) Phylogenetic Tree(s): OG_05_0001016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo415432
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00050p00034460 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
Smo236749 No alias Alpha-L-fucosidase 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Smo412226 No alias Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Smo415429 No alias Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica 0.06 Archaeplastida
Smo415436 No alias Alpha-L-fucosidase 1 OS=Arabidopsis thaliana 0.08 Archaeplastida
Smo431526 No alias Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Zm00001e010188_P001 No alias Alpha-L-fucosidase 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004592 pantoate-beta-alanine ligase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000421 FA58C 204 282
No external refs found!