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  5. Smo415440

Smo415440


Description : Vesicle trafficking.Coat protein II (COPII) coatomer machinery.Sec16 Sar1-GTPase-regulating protein


Gene families : OG0000907 (Archaeplastida) Phylogenetic Tree(s): OG0000907_tree ,
OG_05_0000738 (LandPlants) Phylogenetic Tree(s): OG_05_0000738_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo415440
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Smo412224 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 Archaeplastida
Smo415403 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 Archaeplastida
Smo415484 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR024298 ACE1_Sec16_Sec31 3 83
No external refs found!