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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Aerial tissue - Light - ZT1 | Aerial tissue - Light - ZT3 | Aerial tissue - Light - ZT5 | Aerial tissue - Light - ZT7 | Aerial tissue - Light - ZT9 | Aerial tissue - Light - ZT11 | Aerial tissue - Dark - ZT1 | Aerial tissue - Dark - ZT3 | Aerial tissue - Dark - ZT5 | Aerial tissue - Dark - ZT7 | Aerial tissue - Dark - ZT9 | Aerial tissue - Dark - ZT11 | Roots | Root elongation and differentiation zone | Root meristematic zone | Aerial roots and rhizophores | Shoot tips | Microphyll | Strobili | Shoot apical meristem - AC | Shoot apical meristem - Core | Shoot apical meristem - P1 | Stem - Top | Stem - Bottom | Whole plant | Aerial tissue - Stress - Dark | Aerial tissue - Stress - High light | Aerial tissue - Stress - Cont | Aerial tissue - Stress - 37C 1h | Aerial tissue - Stress - 37C 3h | Aerial tissue - Stress - 4C 1h | Aerial tissue - Stress - 4C 3h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -1.11 | 2.0 | - | 0.77 | -0.78 | 1.18 | 0.72 | -1.09 | -1.0 | -0.51 | - | -0.22 | -0.28 | -0.07 | 2.49 | 1.32 | -0.19 | 1.12 | 1.32 | 0.25 | 0.47 | - | -1.31 | - | - | - | - | - | - | -1.43 | - | - | |
| 1.53 | 1.96 | 0.62 | -1.2 | - | -1.43 | - | -1.05 | -1.91 | -0.82 | 0.56 | 1.83 | 0.57 | -0.83 | -4.05 | 1.15 | -3.37 | -1.25 | -1.78 | - | - | - | -0.51 | 0.73 | 0.96 | 1.47 | 0.51 | -0.09 | 0.33 | -0.77 | -3.39 | - | |
| 0.01 | -0.02 | -0.03 | -0.29 | 0.29 | 0.34 | -0.23 | 0.2 | -0.1 | -0.13 | 0.18 | -0.67 | 1.03 | -0.61 | 0.17 | 0.98 | -0.16 | 0.5 | 1.17 | - | - | - | 0.64 | 0.91 | -4.69 | -1.53 | -0.17 | 0.18 | -0.1 | 0.03 | -0.11 | 0.06 | |
| 0.65 | 2.78 | 1.03 | 0.04 | 0.74 | 0.08 | 1.51 | - | -0.13 | - | 1.03 | 0.96 | - | - | - | - | 0.72 | 0.6 | -0.28 | - | - | - | - | - | - | - | - | - | 1.41 | 0.78 | -1.22 | 0.31 | |
| -0.69 | - | - | -2.23 | -1.67 | -0.05 | - | 2.71 | 2.21 | 0.02 | - | 1.74 | - | -1.94 | 1.39 | - | 1.2 | 0.94 | 0.86 | - | - | - | - | - | - | - | - | - | 1.75 | - | 0.84 | -1.8 | |
| 0.28 | 2.24 | -0.91 | -0.59 | - | - | - | - | -0.92 | -0.93 | - | - | -1.08 | - | - | 1.08 | 1.08 | 0.25 | 1.9 | - | - | - | 0.38 | 0.61 | - | 0.58 | - | - | 1.84 | 1.35 | 1.49 | -0.07 | |
| - | -0.79 | - | - | 0.62 | - | 1.38 | 1.55 | 1.91 | - | - | 0.34 | - | 1.28 | - | 2.27 | - | - | 2.19 | - | - | - | 1.67 | - | - | 0.57 | - | - | 0.56 | - | - | 0.45 | |
| -0.1 | 1.15 | 0.66 | 0.76 | 0.67 | 0.5 | 0.37 | 0.33 | -0.64 | 0.93 | -0.01 | -0.2 | 0.77 | 0.91 | -0.05 | 0.55 | 0.13 | -3.72 | 0.49 | - | -1.18 | - | -0.09 | -0.55 | - | -0.3 | -0.74 | -0.4 | -0.54 | -0.55 | -0.54 | -0.43 | |
| -1.69 | 1.47 | - | -0.67 | - | 1.06 | -0.38 | 1.62 | - | 1.83 | - | -0.33 | 0.89 | -0.22 | -0.88 | 1.7 | - | - | -0.82 | - | - | - | - | - | - | 1.67 | 1.28 | - | 0.84 | 1.56 | -0.77 | - | |
| 2.32 | 3.61 | -0.55 | 0.43 | 2.38 | -1.19 | - | -0.58 | 2.54 | -0.72 | - | -22.36 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 0.59 | 2.66 | 0.51 | 1.92 | 1.95 | 0.56 | -1.8 | 1.23 | 0.95 | 0.71 | -0.03 | -0.77 | -2.5 | -0.24 | -1.39 | -2.46 | -2.62 | - | -2.63 | - | - | - | - | -2.63 | - | -0.58 | - | 1.54 | - | -2.51 | - | - | |
| - | 3.02 | - | - | - | 0.15 | - | - | - | - | - | - | 3.52 | - | - | - | 0.06 | - | 2.38 | - | - | - | 0.0 | - | - | - | - | - | 0.97 | 0.08 | 0.05 | - | |
| 0.42 | 1.25 | 0.86 | -0.4 | -0.12 | 0.38 | -0.14 | 0.25 | 0.03 | 0.27 | 0.32 | 0.53 | 0.86 | 0.57 | 0.96 | 0.14 | 0.26 | -0.98 | -0.04 | -1.87 | - | - | -0.19 | -0.1 | -0.33 | -0.94 | -0.38 | -0.88 | -0.12 | 0.11 | -1.28 | -1.68 | |
| - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 0.81 | 1.69 | -0.24 | 0.28 | - | -0.28 | -0.76 | -0.99 | -0.67 | -0.19 | -1.34 | 0.28 | 1.45 | 0.47 | 0.48 | 1.52 | -0.48 | -2.14 | 1.43 | -1.12 | 1.12 | - | -1.01 | -2.07 | 1.47 | 0.42 | - | - | - | - | - | -1.23 | |
| 0.65 | 2.4 | 1.22 | 0.86 | - | -0.2 | 0.7 | -1.6 | - | -0.44 | -1.34 | 0.29 | -1.05 | 1.5 | 1.51 | -0.05 | - | - | 1.38 | - | - | - | - | -0.12 | - | - | 1.19 | 1.01 | - | -0.2 | - | - | |
| - | - | - | - | - | - | - | - | 1.84 | - | - | - | 2.36 | - | - | - | 2.21 | - | 3.2 | - | - | - | - | 2.27 | - | - | - | - | - | 2.22 | - | - | |
| - | - | - | - | - | - | - | 1.35 | 3.58 | - | - | - | - | - | - | - | 1.67 | 3.11 | 1.52 | - | - | - | 1.48 | - | - | - | - | - | - | - | - | - | |
| - | 3.21 | 1.33 | - | 0.18 | - | 0.98 | - | - | -0.13 | - | 1.54 | 0.18 | - | - | 1.34 | - | 0.4 | - | - | - | - | 1.7 | 1.03 | - | - | - | - | - | - | 0.05 | 0.98 | |
| -2.0 | 1.97 | -0.33 | 0.69 | -0.45 | - | - | 0.12 | - | - | -0.73 | -1.62 | 1.84 | 0.39 | 0.79 | 2.43 | - | -1.2 | 1.84 | - | - | - | - | 0.02 | - | - | - | 2.31 | -1.56 | - | -1.59 | - | |
| 0.18 | 0.75 | -0.35 | -1.18 | -1.04 | -1.04 | -0.32 | -0.45 | -1.08 | -1.57 | -0.64 | 0.26 | 1.09 | -0.66 | -0.16 | 1.13 | 0.04 | -0.2 | 1.17 | -3.33 | -0.33 | - | 0.37 | 0.23 | 0.27 | 0.41 | -0.06 | -1.86 | 0.71 | 0.91 | -0.05 | 0.25 | |
| 0.59 | 1.5 | 0.55 | 0.77 | 0.36 | 0.99 | -2.24 | 1.2 | 0.79 | 0.5 | 0.68 | -0.15 | -0.04 | -1.48 | -1.28 | 0.43 | -3.35 | -3.05 | 1.2 | - | - | - | -4.25 | -3.55 | -0.36 | 0.57 | 1.3 | 0.96 | -2.36 | -1.98 | -4.15 | -3.01 | |
| 2.12 | 2.67 | - | 0.19 | -1.02 | 0.01 | -1.18 | 0.9 | 0.27 | -1.43 | 0.79 | 1.45 | - | - | - | 0.68 | -0.16 | - | -0.16 | - | - | - | - | -1.1 | - | 0.08 | 1.86 | - | -1.27 | 0.43 | - | - | |
| 0.02 | 1.78 | -0.14 | - | -1.34 | -0.82 | - | 0.45 | 0.39 | - | 1.23 | - | 2.89 | - | 0.34 | 0.62 | -0.78 | 0.18 | 3.06 | - | - | - | - | - | - | - | - | - | -1.33 | - | - | - | |
| 0.25 | 1.14 | -0.0 | 0.32 | 0.25 | 0.73 | -0.1 | 0.31 | -0.52 | 0.17 | -0.21 | 0.41 | 0.98 | -1.01 | -0.11 | 0.38 | -1.72 | -5.3 | 0.97 | -1.59 | - | - | -2.51 | -2.43 | 0.73 | 1.07 | 1.45 | 1.24 | -4.02 | -1.62 | -1.86 | -3.01 | |
| - | - | - | - | - | - | - | 1.68 | 2.69 | - | - | - | - | - | - | - | - | - | 4.48 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 1.3 | 2.28 | 0.58 | -0.26 | 1.61 | 1.27 | -3.43 | - | 0.09 | 0.47 | -0.84 | 1.1 | -1.82 | 1.67 | 0.76 | -2.92 | - | - | -0.92 | - | -0.99 | 0.59 | -2.2 | - | - | 0.29 | - | 1.11 | -3.36 | - | - | -3.33 | |
| - | - | - | - | - | - | - | - | 3.76 | - | - | - | - | - | - | - | - | - | 4.21 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 2.88 | - | - | - | - | - | - | - | 4.62 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -1.21 | 2.48 | 1.07 | -1.39 | - | - | - | -1.97 | -1.76 | -2.07 | - | - | 2.34 | -0.26 | - | 3.2 | - | -0.34 | 0.8 | - | - | - | -1.84 | - | 0.39 | -0.66 | - | - | 0.52 | -1.75 | -0.19 | -1.84 | |
| 1.07 | 1.67 | -2.51 | -0.06 | 0.28 | - | -0.22 | -0.17 | -1.18 | -0.38 | - | 0.37 | - | -2.18 | 0.85 | -0.84 | - | 0.56 | 1.84 | - | - | - | -0.02 | 0.52 | 0.73 | 0.07 | -0.87 | 1.73 | 0.84 | 0.32 | -1.1 | - | |
| -1.3 | 2.32 | -1.2 | - | 0.99 | -0.3 | - | 1.59 | -1.75 | -0.17 | - | -1.44 | 0.24 | - | 2.31 | 1.2 | - | - | 0.48 | - | - | - | -1.39 | -0.33 | - | 0.76 | -0.14 | 1.88 | -0.33 | - | -1.36 | -1.42 | |
| 0.31 | 2.53 | - | 1.0 | - | 0.38 | 0.24 | 0.03 | -1.02 | 0.13 | - | -2.01 | - | - | -0.92 | - | 0.12 | - | -0.33 | - | - | - | 0.36 | -0.9 | - | 0.69 | -0.72 | 1.88 | 0.37 | 0.1 | 1.76 | 0.8 | |
| -0.22 | 2.12 | 0.81 | -2.19 | -1.29 | 0.02 | 1.88 | 1.9 | 0.68 | 0.38 | - | -0.95 | - | -0.54 | -0.19 | - | -1.6 | - | -2.66 | 1.06 | - | - | - | -1.58 | 0.38 | 0.04 | -0.7 | 2.32 | -2.82 | - | - | - | |
| -1.42 | 1.27 | -1.87 | 1.07 | -0.44 | -0.51 | 0.34 | 0.47 | 1.57 | -1.75 | -0.66 | 0.63 | - | - | - | -1.2 | - | - | 0.81 | - | - | - | 0.49 | 0.83 | 0.56 | 0.51 | 0.82 | 0.74 | 1.06 | 1.51 | -1.52 | -1.58 | |
| 1.06 | 1.65 | 0.29 | -0.54 | -2.97 | 0.8 | -0.87 | -1.24 | 0.07 | -0.94 | -0.55 | 0.87 | -2.58 | - | - | -1.39 | -3.99 | - | 2.08 | - | - | - | 2.12 | 1.69 | 1.36 | - | -2.09 | 0.35 | -1.69 | -2.78 | -0.44 | -2.09 | |
| -0.87 | 1.27 | -0.63 | 0.99 | -2.15 | 0.73 | 0.23 | 1.15 | 0.7 | 0.56 | 0.56 | -0.25 | 0.74 | -0.4 | -0.61 | 0.05 | 0.13 | -0.75 | 0.24 | - | - | - | -1.68 | -0.2 | -1.42 | 0.41 | 0.16 | 1.03 | -0.5 | 0.23 | -0.7 | -2.34 | |
| -0.4 | 0.53 | - | - | - | 2.39 | - | - | 2.35 | 0.49 | - | - | - | 0.52 | - | - | - | 2.36 | - | - | 3.3 | - | - | 0.7 | - | - | - | - | - | - | - | - | |
| -0.17 | 0.8 | -2.22 | -0.69 | 0.3 | -0.7 | -0.45 | -1.09 | -0.4 | 0.55 | -1.65 | -0.59 | 0.95 | 0.1 | -0.06 | 1.22 | -0.63 | -0.04 | 1.57 | - | - | - | 0.74 | 0.43 | - | -0.9 | 0.32 | 0.44 | 0.1 | 0.56 | 0.43 | 0.43 | |
| -0.51 | 1.65 | 0.54 | -1.63 | 0.25 | -0.24 | -18.7 | 0.43 | 0.85 | - | 0.86 | 0.04 | 0.33 | 2.38 | 1.48 | -0.14 | -0.46 | -21.1 | -1.25 | - | - | - | -2.05 | -2.51 | -1.23 | 0.44 | 1.68 | 0.56 | -5.47 | - | -6.77 | -2.68 | |
| - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -0.56 | 1.85 | -1.34 | 1.02 | -0.87 | -0.86 | -1.06 | -1.22 | -1.31 | - | -1.08 | - | - | - | 1.98 | 0.85 | -0.81 | - | 1.65 | - | - | - | - | 1.34 | - | 0.19 | 1.49 | 2.31 | -1.04 | - | - | -0.01 | |
| -2.1 | 2.21 | -0.38 | 2.22 | 2.2 | - | 1.4 | -0.16 | - | - | 0.99 | -0.94 | - | -1.0 | 0.77 | -1.58 | - | - | - | - | - | -0.69 | - | - | 1.56 | -0.67 | -0.58 | 1.54 | -0.91 | - | -2.3 | - | |
| 0.12 | 1.85 | -0.21 | 0.04 | 2.29 | 0.79 | 0.61 | -0.12 | 1.86 | -0.62 | -1.16 | 0.47 | -1.21 | -1.23 | 1.02 | 0.3 | -3.59 | - | -1.28 | - | - | - | - | -2.76 | -1.33 | 0.33 | 0.43 | 1.08 | - | -2.62 | - | -2.62 | |
| 0.19 | 3.31 | - | 2.22 | 1.59 | - | - | - | - | 1.81 | - | 1.88 | - | 0.76 | - | 0.64 | - | - | 0.37 | 0.6 | - | - | - | - | - | - | - | - | - | - | - | - | |
| 0.5 | 0.4 | -1.25 | -1.14 | 0.76 | -0.24 | 0.37 | -0.11 | 1.21 | 0.29 | 0.33 | 0.39 | 0.66 | -0.61 | 1.07 | 0.55 | -0.2 | -1.24 | -0.27 | - | -0.78 | - | -0.29 | -0.06 | -3.17 | -0.89 | 0.08 | 0.72 | -0.08 | 0.09 | -0.27 | 0.09 | |
| 0.03 | 1.62 | 0.64 | 1.47 | 0.4 | 1.06 | 0.2 | 1.84 | -0.42 | -1.06 | -1.65 | 0.2 | -2.05 | 0.52 | -0.69 | -2.01 | -3.02 | 1.13 | 0.15 | -0.92 | - | - | -1.57 | -1.55 | - | -0.87 | 0.93 | 0.84 | -3.1 | -2.12 | -0.82 | -1.19 | |
| -0.22 | 4.19 | - | 1.28 | -1.28 | 2.14 | 1.75 | - | - | -0.01 | - | 0.3 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 1.03 | 0.86 | 1.28 | -0.3 | 1.4 | 1.56 | -0.81 | 0.39 | 1.48 | -0.24 | -1.76 | 0.27 | 1.22 | 0.55 | -2.53 | -1.04 | -5.12 | -25.76 | 0.27 | - | - | - | -2.27 | -5.23 | -1.09 | 0.66 | 1.4 | 0.32 | -3.45 | -2.16 | -3.58 | -5.09 | |
| -2.62 | 2.49 | 1.11 | -0.37 | -1.04 | -1.04 | 0.73 | 0.12 | -1.18 | -1.35 | -0.26 | - | -1.19 | - | -0.81 | - | 0.74 | 1.76 | 0.25 | - | - | - | -1.18 | - | - | -0.09 | 2.57 | - | -0.25 | 1.05 | - | -1.34 | |
| 1.13 | 4.24 | - | - | - | 2.2 | 2.64 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 0.74 | 0.26 | 0.22 | -0.45 | -0.63 | 0.26 | -0.71 | 0.08 | 0.13 | -0.59 | -0.04 | -0.74 | 0.82 | -0.85 | -0.19 | 1.25 | 0.27 | 1.62 | 1.04 | - | - | - | 0.67 | 0.45 | - | -1.27 | -1.33 | -1.24 | 0.48 | 0.13 | -0.43 | 0.08 | |
| 0.08 | 2.73 | - | - | - | 0.74 | - | - | 0.65 | -0.18 | -1.02 | -0.93 | - | - | - | - | 0.82 | 0.15 | 0.18 | - | - | - | 0.13 | 0.76 | - | 1.78 | 1.36 | 1.38 | 0.68 | -0.81 | 0.15 | -0.92 | |
| 0.14 | 3.24 | - | -0.84 | 0.7 | - | 1.05 | -0.63 | 0.92 | -0.15 | -0.94 | - | 1.46 | 1.25 | -1.45 | - | -0.82 | -0.14 | -0.82 | - | - | - | 0.23 | - | - | 0.81 | - | 1.46 | - | - | - | - | |
| 0.22 | 1.73 | 0.86 | 0.19 | -0.57 | 0.67 | -1.76 | - | - | -2.02 | - | - | 0.48 | 1.55 | 1.27 | 1.45 | -1.13 | -1.05 | 1.1 | - | - | - | -2.27 | - | 1.2 | 0.49 | 1.25 | 0.61 | -0.1 | - | -2.1 | -2.18 | |
| 0.24 | 2.22 | - | 1.04 | - | 0.55 | 0.26 | 1.11 | 2.54 | 1.78 | -1.67 | -0.24 | -3.87 | - | -0.08 | -0.64 | - | - | -2.51 | - | - | - | 0.52 | 0.03 | - | -1.24 | - | - | -0.16 | 1.68 | - | -3.37 | |
| -1.31 | 2.53 | 1.83 | - | 1.79 | - | 1.99 | - | - | - | - | -1.33 | -1.06 | - | -4.38 | - | -0.9 | - | -0.14 | - | - | - | - | - | - | 0.25 | 3.43 | - | -0.98 | - | - | - | |
| 1.01 | 1.28 | 0.76 | 0.84 | 0.78 | 0.53 | -0.43 | 0.82 | -0.26 | -0.75 | 0.76 | -0.59 | - | - | - | - | 1.08 | 0.72 | 0.49 | - | - | - | 0.78 | 0.21 | 0.54 | -0.35 | -0.33 | -0.51 | 0.23 | 0.07 | -0.85 | -4.07 | |
| -0.09 | 3.78 | -6.24 | -5.11 | 0.47 | 0.6 | 1.22 | -1.96 | - | 0.6 | 2.35 | -5.62 | - | -0.32 | -0.82 | - | - | - | - | 0.21 | - | - | - | - | 1.12 | - | - | - | -1.01 | - | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.