AMTR_s00017p00119990 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00017.45

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0000168 (SeedPlants) Phylogenetic Tree(s): OG_06_0000168_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00017p00119990
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00044p00058960	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.01	Archaeplastida
AT3G03200	anac045, NAC045	NAC domain containing protein 45	0.02	Archaeplastida
AT3G04070	anac047, NAC047	NAC domain containing protein 47	0.01	Archaeplastida
AT3G10500	NAC053, anac053	NAC domain containing protein 53	0.03	Archaeplastida
AT3G17730	anac057, NAC057	NAC domain containing protein 57	0.02	Archaeplastida
AT5G13180	VNI2, NAC083, ANAC083	NAC domain containing protein 83	0.02	Archaeplastida
AT5G61430	ANAC100, ATNAC5, NAC100	NAC domain containing protein 100	0.14	Archaeplastida
GSVIVT01018623001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
Gb_01126	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os06g46270.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
LOC_Os07g37920.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc05g007550.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc06g069710.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc09g025310.4.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc10g083450.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc11g065540.1.1	No alias	transcription factor (NAC)	0.01	Archaeplastida
Solyc12g017400.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e014291_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	Neighborhood
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Neighborhood
BP	GO:0006595	polyamine metabolic process	IEP	Neighborhood
BP	GO:0006596	polyamine biosynthetic process	IEP	Neighborhood
BP	GO:0006597	spermine biosynthetic process	IEP	Neighborhood
BP	GO:0008215	spermine metabolic process	IEP	Neighborhood
BP	GO:0008216	spermidine metabolic process	IEP	Neighborhood
BP	GO:0008295	spermidine biosynthetic process	IEP	Neighborhood
BP	GO:0009308	amine metabolic process	IEP	Neighborhood
BP	GO:0009309	amine biosynthetic process	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016830	carbon-carbon lyase activity	IEP	Neighborhood
MF	GO:0016831	carboxy-lyase activity	IEP	Neighborhood
BP	GO:0017144	drug metabolic process	IEP	Neighborhood
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Neighborhood
BP	GO:0044106	cellular amine metabolic process	IEP	Neighborhood
BP	GO:0097164	ammonium ion metabolic process	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	8	137

External Links

No external refs found!